RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 MTERF2Q49AM1 385 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 HAUS6Q7Z4H7 955 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 SPIRE2Q8WWL2 714 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 HHIPL1Q96JK4 782 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 KATNBL1Q9H079 304 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 XPNPEP1Q9NQW7 623 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 MFAP3LO75121 409 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 SNAI1O95863 264 aaPredicted RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 C17orf99Q6UX52 265 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 PLPPR4Q7Z2D5 763 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 C17orf53Q8N3J3 647 aaPredicted RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 RETREG2Q8NC44 543 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 TMEM174Q8WUU8 243 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 CPLX3Q8WVH0 158 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 CCDC51Q96ER9 411 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 FAM167AQ96KS9 214 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 DHX33Q9H6R0 707 aaKnown RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 AGPAT3Q9NRZ7 376 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 ABT1Q9ULW3 272 aaKnown RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 PPME1Q9Y570 386 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 EMSYQ7Z589 1322 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 STX10O60499 249 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 NPTX2P47972 431 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 FXR1P51114 621 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP39-207ENST00000450066 POLGP54098 1239 aaPredicted RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 LAMC2Q13753 1193 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 EMC2Q15006 297 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 SYCP1Q15431 976 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 TARBP2Q15633 366 aaKnown RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 TMEM139Q8IV31 216 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 COPS5Q92905 334 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 BAG1Q99933 345 aaPredicted RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 TINF2Q9BSI4 451 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 NUP58Q9BVL2 599 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 CGNQ9P2M7 1197 aaKnown RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 ARMCX3Q9UH62 379 aaPredicted RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 KCNG1Q9UIX4 513 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP39-207ENST00000450066 TMEM88BA6NKF7 163 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 CLIC2O15247 247 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 SLC16A4O15374 487 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 AKAP3O75969 853 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 RFC5P40937 340 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 SLC26A2P50443 739 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 PPP2R3AQ06190 1150 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 MYBPC2Q14324 1141 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 MORN1Q5T089 497 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 TMEM63BQ5T3F8 832 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 SLC9A9Q8IVB4 645 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 TMEM161BQ8NDZ6 487 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 SLC7A3Q8WY07 619 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 GLG1Q92896 1179 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 EMID1Q96A84 441 aaPredicted RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 HVCN1Q96D96 273 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 IQCDQ96DY2 449 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 METTL14Q9HCE5 456 aaKnown RBP15.66■□□□□ 0.1
USP39-207ENST00000450066 DMAC2Q9NW81 257 aa15.66■□□□□ 0.1
USP39-207ENST00000450066 CCDC169A6NNP5 214 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 EPB41P11171 864 aaKnown RBP15.65■□□□□ 0.1
USP39-207ENST00000450066 SNRPFP62306 86 aaKnown RBP15.65■□□□□ 0.1
USP39-207ENST00000450066 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
USP39-207ENST00000450066 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 MKNK1Q9BUB5 465 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 ABHD16BQ9H3Z7 469 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 KMT5AQ9NQR1 393 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 KCND1Q9NSA2 647 aa15.65■□□□□ 0.1
USP39-207ENST00000450066 ARHGAP6O43182 974 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 GH1P01241 217 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 ABCD1P33897 745 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 TM4SF4P48230 202 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 SOX10P56693 466 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 MAP2K5Q13163 448 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 NPLOC4Q8TAT6 608 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 IFT74Q96LB3 600 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 NAA15Q9BXJ9 866 aaKnown RBP15.64■□□□□ 0.09
USP39-207ENST00000450066 TTYH3Q9C0H2 523 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 POLR3FQ9H1D9 316 aaPredicted RBP15.64■□□□□ 0.09
USP39-207ENST00000450066 SMARCAD1Q9H4L7 1026 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 CAPN11Q9UMQ6 739 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 SIK3Q9Y2K2 1263 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 TRIM21P19474 475 aaKnown RBP15.64■□□□□ 0.09
USP39-207ENST00000450066 SCP2P22307 547 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 PSMC2P35998 433 aaKnown RBP15.64■□□□□ 0.09
USP39-207ENST00000450066 C12orf56Q8IXR9 622 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 ATP8B4Q8TF62 1192 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 TBX20Q9UMR3 447 aa15.64■□□□□ 0.09
USP39-207ENST00000450066 EXOC7Q9UPT5 735 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms