RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 USP28Q96RU2 1077 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 ZBED2Q9BTP6 218 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 MMTAG2Q9BU76 263 aaKnown RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 PBX4Q9BYU1 374 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 GCOM2Q9BZD3 368 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 ST3GAL5Q9UNP4 418 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 A0A087WZ62 844 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 GPR182O15218 404 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 GAS2O43903 313 aaKnown RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 F13A1P00488 732 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 EIF4BP23588 611 aaKnown RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 DNAJB2P25686 324 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 GRIN1Q05586 938 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 PTPAQ15257 358 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 RAB30Q15771 203 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 TIFAQ96CG3 184 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 PLIN2Q99541 437 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 FDXACB1Q9BRP7 624 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 XPNPEP1Q9NQW7 623 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 TFIP11Q9UBB9 837 aaKnown RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-211ENST00000449704 DNM3Q9UQ16 869 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 COL4A3BPQ9Y5P4 624 aa17.49■□□□□ 0.39
TOP3B-211ENST00000449704 ENPP3O14638 875 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 CSDE1O75534 798 aaKnown RBP17.48■□□□□ 0.39
TOP3B-211ENST00000449704 UPP2O95045 317 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 SRGAP2CP0DJJ0 459 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 DARSP14868 501 aaKnown RBP17.48■□□□□ 0.39
TOP3B-211ENST00000449704 MYOGP15173 224 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 IBSPP21815 317 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-211ENST00000449704 UBA7P41226 1012 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 LAMTOR4Q0VGL1 99 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 STK38Q15208 465 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 PADI6Q6TGC4 694 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 CABP7Q86V35 215 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 FAM228AQ86W67 206 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 AK8Q96MA6 479 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 FTHL17Q9BXU8 183 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 BHMT2Q9H2M3 363 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 PCDHA11Q9Y5I1 949 aa17.48■□□□□ 0.39
TOP3B-211ENST00000449704 E9PMD0 336 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 ASAP2O43150 1006 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 TLL1O43897 1013 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 FGFR4P22455 802 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 LONP1P36776 959 aaKnown RBP17.47■□□□□ 0.39
TOP3B-211ENST00000449704 GPR153Q6NV75 609 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 Q7L0L9 218 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 ZNF410Q86VK4 478 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 RASSF8Q8NHQ8 419 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 FAM161BQ96MY7 647 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
TOP3B-211ENST00000449704 NKX2-4Q9H2Z4 354 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 TMX1Q9H3N1 280 aa17.47■□□□□ 0.39
TOP3B-211ENST00000449704 YBX2Q9Y2T7 364 aaKnown RBP17.47■□□□□ 0.39
TOP3B-211ENST00000449704 DENND3A2RUS2 1198 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 DLL1O00548 723 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 EYA4O95677 639 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 CYP11B2P19099 503 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 NASPP49321 788 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 GRB10Q13322 594 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 SLC39A14Q15043 492 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 SPECC1Q5M775 1068 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 FAM102BQ5T8I3 360 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 ZNF697Q5TEC3 545 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 KCNK18Q7Z418 384 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 RTN4RL1Q86UN2 441 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 DEFB123Q8N688 67 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 RNF149Q8NC42 400 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 LINC01599Q8WXQ3 324 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 CLIC6Q96NY7 704 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 PNMA5Q96PV4 448 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 NT5C3AQ9H0P0 336 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 GPRC5CQ9NQ84 441 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 SRPRBQ9Y5M8 271 aaKnown RBP17.46■□□□□ 0.39
TOP3B-211ENST00000449704 SZT2Q5T011 3432 aa17.46■□□□□ 0.39
TOP3B-211ENST00000449704 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
TOP3B-211ENST00000449704 EVPLQ92817 2033 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 MGEA5O60502 916 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 GJB5O95377 273 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 SSBP05455 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
TOP3B-211ENST00000449704 ARL2P36404 184 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 TFDP1Q14186 410 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 HYIQ5T013 277 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 CALML4Q96GE6 196 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 RAD9AQ99638 391 aa17.45■□□□□ 0.38
TOP3B-211ENST00000449704 ADAM2Q99965 735 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms