RNA–Protein interactions for RNA: ENST00000449228.5

BBC3-204, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-204ENST00000449228 PCMTD1Q96MG8 357 aaPredicted RBP27.41■■□□□ 1.98
BBC3-204ENST00000449228 METTL14Q9HCE5 456 aaKnown RBP27.41■■□□□ 1.98
BBC3-204ENST00000449228 PDGFCQ9NRA1 345 aa27.41■■□□□ 1.98
BBC3-204ENST00000449228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.41■■□□□ 1.98
BBC3-204ENST00000449228 MYH9P35579 1960 aaKnown RBP27.4■■□□□ 1.98
BBC3-204ENST00000449228 PLXNA1Q9UIW2 1896 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 CLIC2O15247 247 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 MFAP3LO75121 409 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 KCNJ6P48051 423 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 GTF2BQ00403 316 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 SYCP1Q15431 976 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 KSR1Q8IVT5 923 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 MAML3Q96JK9 1138 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 IFT74Q96LB3 600 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 SPTLC3Q9NUV7 552 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 CGNQ9P2M7 1197 aaKnown RBP27.4■■□□□ 1.98
BBC3-204ENST00000449228 ARMCX3Q9UH62 379 aaPredicted RBP27.4■■□□□ 1.98
BBC3-204ENST00000449228 PPME1Q9Y570 386 aa27.4■■□□□ 1.98
BBC3-204ENST00000449228 CCDC169A6NNP5 214 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 STX10O60499 249 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 PPP2R3AQ06190 1150 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 TAPT1Q6NXT6 567 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 TRIM59Q8IWR1 403 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 C17orf53Q8N3J3 647 aaPredicted RBP27.39■■□□□ 1.98
BBC3-204ENST00000449228 SPIRE2Q8WWL2 714 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 SLC7A3Q8WY07 619 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 ZFYVE28Q9HCC9 887 aa27.39■■□□□ 1.98
BBC3-204ENST00000449228 SLC16A4O15374 487 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 TLR2O60603 784 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 LGR5O75473 907 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 RFC5P40937 340 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 LAMC2Q13753 1193 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 EMC2Q15006 297 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 PLPPR4Q7Z2D5 763 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 MSL3Q8N5Y2 521 aaKnown RBP27.39■■□□□ 1.97
BBC3-204ENST00000449228 HVCN1Q96D96 273 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 NAA15Q9BXJ9 866 aaKnown RBP27.39■■□□□ 1.97
BBC3-204ENST00000449228 KMT5AQ9NQR1 393 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 AGPAT3Q9NRZ7 376 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 EXOC7Q9UPT5 735 aa27.39■■□□□ 1.97
BBC3-204ENST00000449228 ARID2Q68CP9 1835 aa27.38■■□□□ 1.97
BBC3-204ENST00000449228 RBM47A0AV96 593 aaKnown RBP27.38■■□□□ 1.97
BBC3-204ENST00000449228 NKRFO15226 690 aaKnown RBP eCLIP27.38■■□□□ 1.971e-6■■■□□ 16
BBC3-204ENST00000449228 TRIM21P19474 475 aaKnown RBP27.38■■□□□ 1.97
BBC3-204ENST00000449228 ABCD1P33897 745 aa27.38■■□□□ 1.97
BBC3-204ENST00000449228 NPTX2P47972 431 aa27.38■■□□□ 1.97
BBC3-204ENST00000449228 SNRPFP62306 86 aaKnown RBP27.38■■□□□ 1.97
BBC3-204ENST00000449228 NTPCRQ9BSD7 190 aaKnown RBP27.38■■□□□ 1.97
BBC3-204ENST00000449228 TINF2Q9BSI4 451 aa27.38■■□□□ 1.97
BBC3-204ENST00000449228 XPNPEP1Q9NQW7 623 aa27.38■■□□□ 1.97
BBC3-204ENST00000449228 EMSYQ7Z589 1322 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 FAM155AB1AL88 458 aaPredicted RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 H0YCG3 227 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 ARHGAP6O43182 974 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 SLC26A2P50443 739 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 FXR1P51114 621 aaKnown RBP eCLIP27.37■■□□□ 1.97
BBC3-204ENST00000449228 MYBPC2Q14324 1141 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 BBXQ8WY36 941 aaPredicted RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 COPS5Q92905 334 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 HHIPL1Q96JK4 782 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 MKNK1Q9BUB5 465 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 DHX33Q9H6R0 707 aaKnown RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 MCM3APO60318 1980 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 TMEM88BA6NKF7 163 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 GH1P01241 217 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 PSMC2P35998 433 aaKnown RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 C17orf99Q6UX52 265 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 POLR3FQ9H1D9 316 aaPredicted RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 SMARCAD1Q9H4L7 1026 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 FRMD4BQ9Y2L6 1034 aa27.37■■□□□ 1.97
BBC3-204ENST00000449228 LUC7L2Q9Y383 392 aaKnown RBP27.37■■□□□ 1.97
BBC3-204ENST00000449228 KIF3CO14782 793 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 AKAP3O75969 853 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 SNAI1O95863 264 aaPredicted RBP27.36■■□□□ 1.97
BBC3-204ENST00000449228 FIGNQ5HY92 759 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 SLC9A9Q8IVB4 645 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 EXOC8Q8IYI6 725 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 ABHD16BQ9H3Z7 469 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 CAPN11Q9UMQ6 739 aa27.36■■□□□ 1.97
BBC3-204ENST00000449228 XRCC5P13010 732 aaKnown RBP27.35■■□□□ 1.97
BBC3-204ENST00000449228 KRT9P35527 623 aa27.35■■□□□ 1.97
BBC3-204ENST00000449228 TSR1Q2NL82 804 aaKnown RBP27.35■■□□□ 1.97
BBC3-204ENST00000449228 TMEM161BQ8NDZ6 487 aa27.35■■□□□ 1.97
BBC3-204ENST00000449228 ZNF236Q9UL36 1845 aa27.35■■□□□ 1.97
BBC3-204ENST00000449228 SCP2P22307 547 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 ARHGAP1Q07960 439 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 MAP2K5Q13163 448 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 TARBP2Q15633 366 aaKnown RBP27.34■■□□□ 1.97
BBC3-204ENST00000449228 MORN1Q5T089 497 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 TMEM139Q8IV31 216 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 KATNBL1Q9H079 304 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 ABHD10Q9NUJ1 306 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 DMAC2Q9NW81 257 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 TBX20Q9UMR3 447 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 TTC26A0AVF1 554 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 SOX10P56693 466 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 PPP2R5AQ15172 486 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 FAM186BQ8IYM0 893 aa27.34■■□□□ 1.97
BBC3-204ENST00000449228 ZNF397Q8NF99 534 aaPredicted RBP27.34■■□□□ 1.97
BBC3-204ENST00000449228 NPLOC4Q8TAT6 608 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms