RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RRN3P2A6NIE6 340 aa21.29■■□□□ 1
RPS28-202ENST00000449223 SFI1A8K8P3 1242 aa21.29■■□□□ 1
RPS28-202ENST00000449223 PPP1R37O75864 691 aa21.29■■□□□ 1
RPS28-202ENST00000449223 KIF20AO95235 890 aa21.29■■□□□ 1
RPS28-202ENST00000449223 MYL3P08590 195 aa21.29■■□□□ 1
RPS28-202ENST00000449223 SCP2P22307 547 aa21.29■■□□□ 1
RPS28-202ENST00000449223 NCKAP1LP55160 1127 aa21.29■■□□□ 1
RPS28-202ENST00000449223 ALCAMQ13740 583 aa21.29■■□□□ 1
RPS28-202ENST00000449223 PKN2Q16513 984 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 SLC9C1Q4G0N8 1177 aa21.29■■□□□ 1
RPS28-202ENST00000449223 ZNF720Q7Z2F6 126 aa21.29■■□□□ 1
RPS28-202ENST00000449223 RNF180Q86T96 592 aa21.29■■□□□ 1
RPS28-202ENST00000449223 DHX40Q8IX18 779 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 FAM178BQ8IXR5 827 aa21.29■■□□□ 1
RPS28-202ENST00000449223 ENOX1Q8TC92 643 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 SH3TC2Q8TF17 1288 aa21.29■■□□□ 1
RPS28-202ENST00000449223 TCP11Q8WWU5 503 aa21.29■■□□□ 1
RPS28-202ENST00000449223 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.29■■□□□ 1
RPS28-202ENST00000449223 ZHX3Q9H4I2 956 aa21.29■■□□□ 1
RPS28-202ENST00000449223 RWDD2AQ9UIY3 292 aa21.29■■□□□ 1
RPS28-202ENST00000449223 PSMA7O14818 248 aa21.29■■□□□ 1
RPS28-202ENST00000449223 HSPA1AP0DMV8 641 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 HSPA1BP0DMV9 641 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 ADAM17P78536 824 aa21.29■■□□□ 1
RPS28-202ENST00000449223 PPFIA1Q13136 1202 aa21.29■■□□□ 1
RPS28-202ENST00000449223 GRIK4Q16099 956 aa21.29■■□□□ 1
RPS28-202ENST00000449223 MARCH8Q5T0T0 291 aa21.29■■□□□ 1
RPS28-202ENST00000449223 IER5Q5VY09 327 aa21.29■■□□□ 1
RPS28-202ENST00000449223 CENPPQ6IPU0 288 aa21.29■■□□□ 1
RPS28-202ENST00000449223 MAEAQ7L5Y9 396 aa21.29■■□□□ 1
RPS28-202ENST00000449223 GLIS3Q8NEA6 775 aa21.29■■□□□ 1
RPS28-202ENST00000449223 SCFD1Q8WVM8 642 aa21.29■■□□□ 1
RPS28-202ENST00000449223 MED15Q96RN5 788 aa21.29■■□□□ 1
RPS28-202ENST00000449223 FGFBP2Q9BYJ0 223 aa21.29■■□□□ 1
RPS28-202ENST00000449223 MRPL44Q9H9J2 332 aaKnown RBP21.29■■□□□ 1
RPS28-202ENST00000449223 SIP14410 1827 aa21.28■■□□□ 1
RPS28-202ENST00000449223 MBLAC1A4D2B0 266 aaPredicted RBP21.28■■□□□ 1
RPS28-202ENST00000449223 SMIM10L2AP0DMW4 78 aa21.28■■□□□ 1
RPS28-202ENST00000449223 SMIM10L2BP0DMW5 78 aa21.28■■□□□ 1
RPS28-202ENST00000449223 CASP5P51878 434 aa21.28■■□□□ 1
RPS28-202ENST00000449223 MYL5Q02045 173 aa21.28■■□□□ 1
RPS28-202ENST00000449223 PAK1Q13153 545 aa21.28■■□□□ 1
RPS28-202ENST00000449223 DMP1Q13316 513 aaPredicted RBP21.28■■□□□ 1
RPS28-202ENST00000449223 MKRN4PQ13434 485 aaPredicted RBP21.28■■□□□ 1
RPS28-202ENST00000449223 NCAPHQ15003 741 aa21.28■■□□□ 1
RPS28-202ENST00000449223 FBXO46Q6PJ61 603 aaPredicted RBP21.28■■□□□ 1
RPS28-202ENST00000449223 MYOCDQ8IZQ8 938 aa21.28■■□□□ 1
RPS28-202ENST00000449223 RETREG2Q8NC44 543 aa21.28■■□□□ 1
RPS28-202ENST00000449223 ZNF507Q8TCN5 953 aa21.28■■□□□ 1
RPS28-202ENST00000449223 TSEN34Q9BSV6 310 aaKnown RBP21.28■■□□□ 1
RPS28-202ENST00000449223 POLR3FQ9H1D9 316 aaPredicted RBP21.28■■□□□ 1
RPS28-202ENST00000449223 POLD4Q9HCU8 107 aa21.28■■□□□ 1
RPS28-202ENST00000449223 EVPLQ92817 2033 aa21.28■■□□□ 1
RPS28-202ENST00000449223 MOXD2PA6NHM9 499 aa21.27■■□□□ 1
RPS28-202ENST00000449223 CABYRO75952 493 aa21.27■■□□□ 1
RPS28-202ENST00000449223 ASGR1P07306 291 aa21.27■■□□□ 1
RPS28-202ENST00000449223 ABCD1P33897 745 aa21.27■■□□□ 1
RPS28-202ENST00000449223 NPTX2P47972 431 aa21.27■■□□□ 1
RPS28-202ENST00000449223 SMTNP53814 917 aa21.27■■□□□ 1
RPS28-202ENST00000449223 PPP2R5AQ15172 486 aa21.27■■□□□ 1
RPS28-202ENST00000449223 LRRC41Q15345 812 aa21.27■■□□□ 1
RPS28-202ENST00000449223 KCNA10Q16322 511 aa21.27■■□□□ 1
RPS28-202ENST00000449223 MTHFD1LQ6UB35 978 aa21.27■■□□□ 1
RPS28-202ENST00000449223 STXBP4Q6ZWJ1 553 aa21.27■■□□□ 1
RPS28-202ENST00000449223 TRAPPC12Q8WVT3 735 aa21.27■■□□□ 1
RPS28-202ENST00000449223 TBC1D7Q9P0N9 293 aa21.27■■□□□ 1
RPS28-202ENST00000449223 PCDHB13Q9Y5F0 798 aa21.27■■□□□ 1
RPS28-202ENST00000449223 SMTNL1A8MU46 457 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 CCNE1P24864 410 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 KLRC1P26715 233 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 NAMPTP43490 491 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 LBX1P52954 281 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 SOX10P56693 466 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 GTF2BQ00403 316 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 MXD4Q14582 209 aaPredicted RBP21.26■□□□□ 0.99
RPS28-202ENST00000449223 LUZP1Q86V48 1076 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 SESTD1Q86VW0 696 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 AOPEPQ8N6M6 819 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 RNF214Q8ND24 703 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 LMBR1Q8WVP7 490 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 NELFBQ8WX92 580 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 PSPC1Q8WXF1 523 aaKnown RBP21.26■□□□□ 0.99
RPS28-202ENST00000449223 BSNDQ8WZ55 320 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 HVCN1Q96D96 273 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 IFT74Q96LB3 600 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 ARHGAP28Q9P2N2 729 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 MAPK8IP1Q9UQF2 711 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 BRCA2P51587 3418 aa21.26■□□□□ 0.99
RPS28-202ENST00000449223 H0YCG3 227 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 GCNT3O95395 438 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 MYBP10242 640 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 GLRA2P23416 452 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 NMT1P30419 496 aaKnown RBP21.25■□□□□ 0.99
RPS28-202ENST00000449223 PEX3P56589 373 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 UVSSAQ2YD98 709 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 ZCWPW2Q504Y3 356 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 CXCL17Q6UXB2 119 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 P2RX5Q93086 422 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 TMEM143Q96AN5 459 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 UNC93B1Q9H1C4 597 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms