RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 RFC5P40937 340 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 KIZQ2M2Z5 673 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 C16orf59Q7L2K0 433 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 DEFB128Q7Z7B8 93 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 RSPH3Q86UC2 560 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 TMEM199Q8N511 208 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 RASSF8Q8NHQ8 419 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 SLC7A3Q8WY07 619 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CALML4Q96GE6 196 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CDX2Q99626 313 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-211ENST00000449159 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CCSER1Q9C0I3 900 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 GPRC5CQ9NQ84 441 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 AKT3Q9Y243 479 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 GINS2Q9Y248 185 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 TMEM265A0A087WTH1 108 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 ARHGEF35A5YM69 484 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 DGAT1O75907 488 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 SSBP05455 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMPD4-211ENST00000449159 FOSL2P15408 326 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 NAALADL2Q58DX5 795 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 FAM26DQ5JW98 314 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 PDILTQ8N807 584 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 TMEM40Q8WWA1 233 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 RNPC3Q96LT9 517 aaKnown RBP11.83□□□□□ -0.52
SMPD4-211ENST00000449159 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 MTRQ99707 1265 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 RUSC1Q9BVN2 902 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-211ENST00000449159 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 POLD4Q9HCU8 107 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 BLOC1S4Q9NUP1 217 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-211ENST00000449159 DNM3Q9UQ16 869 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 PPME1Q9Y570 386 aa11.83□□□□□ -0.52
SMPD4-211ENST00000449159 TTC28Q96AY4 2481 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 SLC26A4O43511 780 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 GPR32O75388 356 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 CXCL10P02778 98 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 PLA2G4BP0C869 781 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 GHRP10912 638 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 TMOD1P28289 359 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 TXLNAP40222 546 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 GPC3P51654 580 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 SLC12A3P55017 1021 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
SMPD4-211ENST00000449159 MCM6Q14566 821 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 LPIN1Q14693 890 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 IER5Q5VY09 327 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 RESP18Q5W5W9 173 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 NME8Q8N427 588 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 PRPF31Q8WWY3 499 aaKnown RBP11.82□□□□□ -0.52
SMPD4-211ENST00000449159 MYLIPQ8WY64 445 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 RAD54LQ92698 747 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 OSMRQ99650 979 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
SMPD4-211ENST00000449159 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-211ENST00000449159 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-211ENST00000449159 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 IL23AQ9NPF7 189 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 TRPV2Q9Y5S1 764 aa11.82□□□□□ -0.52
SMPD4-211ENST00000449159 REV3LO60673 3130 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 NPHP3-ACAD11A0A0J9YXS1 232 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 M0QZ92 97 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 RPLP2P05387 115 aaKnown RBP11.81□□□□□ -0.52
SMPD4-211ENST00000449159 CYP11B2P19099 503 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 RFC2P35250 354 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 ARL2P36404 184 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 DNM2P50570 870 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 LAMTOR4Q0VGL1 99 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 PPIGQ13427 754 aaKnown RBP eCLIP11.81□□□□□ -0.523e-9■■■□□ 18.1
SMPD4-211ENST00000449159 DHX8Q14562 1220 aaKnown RBP11.81□□□□□ -0.52
SMPD4-211ENST00000449159 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 RINT1Q6NUQ1 792 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 PSPC1Q8WXF1 523 aaKnown RBP11.81□□□□□ -0.52
SMPD4-211ENST00000449159 BSNDQ8WZ55 320 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-211ENST00000449159 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■■□ 19.7
SMPD4-211ENST00000449159 SEMA6BQ9H3T3 888 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 AGO3Q9H9G7 860 aaKnown RBP11.81□□□□□ -0.52
SMPD4-211ENST00000449159 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 COL4A3BPQ9Y5P4 624 aa11.81□□□□□ -0.52
SMPD4-211ENST00000449159 CHD7Q9P2D1 2997 aa11.8□□□□□ -0.52
SMPD4-211ENST00000449159 A0A087WZ62 844 aa11.8□□□□□ -0.52
SMPD4-211ENST00000449159 A0A1B0GVL5 298 aa11.8□□□□□ -0.52
SMPD4-211ENST00000449159 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms