RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GDAP1Q8TB36 358 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 C7orf43Q8WVR3 580 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PPP1R9BQ96SB3 815 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 TM6SF1Q9BZW5 370 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 CCDC113Q9H0I3 377 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 STRIP2Q9ULQ0 834 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PCDHAC2Q9Y5I4 1007 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SRPRBQ9Y5M8 271 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SHPRHQ149N8 1683 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 CLDN3O15551 220 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PDHBP11177 359 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 EFNA5P52803 228 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 ARMC6Q6NXE6 501 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 METTL7BQ6UX53 244 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPATA2LQ8IUW3 424 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 ABRAQ8N0Z2 381 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 CAGE1Q8TC20 777 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 DYDC1Q8WWB3 177 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 TGS1Q96RS0 853 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 GPR20Q99678 358 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 FTHL17Q9BXU8 183 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRR29P0C7W0 189 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PDIA3P30101 505 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SHMT1P34896 483 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRAPPC10P48553 1259 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 APBA1Q02410 837 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 A1CFQ9NQ94 594 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SYNPO2Q9UMS6 1093 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 WDR19Q8NEZ3 1342 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRPF40AO75400 957 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 ASGR1P07306 291 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 IFNAR1P17181 557 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 KCNA3P22001 575 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 FBXW4P57775 412 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 KYAT1Q16773 422 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF589Q86UQ0 364 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 PALB2Q86YC2 1186 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 KIFAP3Q92845 792 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 MIS12Q9H081 205 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 LRRC4Q9HBW1 653 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 INCENPQ9NQS7 918 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 MRC1P22897 1456 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 GLI3P10071 1580 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 MYMKA6NI61 221 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SH2B2O14492 632 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 CKMP06732 381 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 DLATP10515 647 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 GRIK1P39086 918 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 ALDH5A1P51649 535 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 MAP4K1Q92918 833 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPZ1Q9BXG8 430 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 HPCAL4Q9UM19 191 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 LAD1O00515 517 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 HEXIM1O94992 359 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 RAB27AP51159 221 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 KCNA10Q16322 511 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 LBX2Q6XYB7 198 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 FILIP1Q7Z7B0 1213 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 TEX2Q8IWB9 1127 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 AFG3L2Q9Y4W6 797 aa6.13□□□□□ -1.43
CDC42BPA-209ENST00000448940 SELPP16109 830 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 HSPA4P34932 840 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CNTN2Q02246 1040 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 SUZ12Q15022 739 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 TEAD4Q15561 434 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 PPP4R4Q6NUP7 873 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 OTOP3Q7RTS5 596 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 APPL2Q8NEU8 664 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CCDC127Q96BQ5 260 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 TBC1D7Q9P0N9 293 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 SNX14Q9Y5W7 946 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 PARP4Q9UKK3 1724 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 INPP4BO15327 924 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPAG1Q07617 926 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 LDLRAD1Q5T700 205 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF560Q96MR9 790 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 DDX50Q9BQ39 737 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 SETD4Q9NVD3 440 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 IGF2BP3O00425 579 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 HIC1Q14526 733 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 EFCAB12Q6NXP0 572 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 NOTUMQ6P988 496 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRIM48Q8IWZ4 208 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ANKLE1Q8NAG6 615 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRRX2Q99811 253 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 MSTO1Q9BUK6 570 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF576Q9H609 170 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF233A6NK53 670 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CTAGE5O15320 804 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CKBP12277 381 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 GAP43P17677 238 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 HOXA7P31268 230 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 RFC5P40937 340 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CTTNQ14247 550 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ITIH5Q86UX2 942 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms