RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CDK17Q00537 523 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MAPK7Q13164 816 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MEA1Q16626 185 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 XKR9Q5GH70 373 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 REXO1L1PQ8IX06 675 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SHCBP1Q8NEM2 672 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 KIFAP3Q92845 792 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 HVCN1Q96D96 273 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MMRN2Q9H8L6 949 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 GABBR1Q9UBS5 961 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SLC45A1Q9Y2W3 748 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ADGRG1Q9Y653 693 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MYH9P35579 1960 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 K7ENM7 598 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 CNMDO75829 334 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 CETPP11597 493 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ERCC3P19447 782 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 HOXD13P35453 343 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SMTNP53814 917 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ACTR2P61160 394 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 CCNA1P78396 465 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MOGSQ13724 837 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 NEDD9Q14511 834 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 KCTD2Q14681 263 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ABHD15Q6UXT9 468 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 RAD9BQ6WBX8 426 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SYCP3Q8IZU3 236 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ACCSQ96QU6 501 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 FIZ1Q96SL8 496 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 STRA6Q9BX79 667 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 EXOC7Q9UPT5 735 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 FRMD4BQ9Y2L6 1034 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 UQCRHLA0A096LP55 91 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 H0YCG3 227 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 DGAT1O75907 488 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 UQCRHP07919 91 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 SUPT20HL2P0C7V6 817 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 SCP2P22307 547 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 HNRNPH3P31942 346 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 GTF2F1P35269 517 aaKnown RBP eCLIP11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 GTF2A2P52657 109 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 KRT83P78385 493 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 CNTN2Q02246 1040 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 UGCGQ16739 394 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 SWSAP1Q6NVH7 229 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 CACNA2D4Q7Z3S7 1137 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 DAW1Q8N136 415 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 TMEM174Q8WUU8 243 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 MMP19Q99542 508 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 CEP72Q9P209 647 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
VIPAS39-203ENST00000448935 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 ZMYM2Q9UBW7 1377 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 IGSF9BQ9UPX0 1349 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 LRRC37A2A6NM11 1700 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 RNF225M0QZC1 329 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 BACH1O14867 736 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 ATG7O95352 703 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 RTP1P59025 263 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 ERVK-24P63145 666 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 GTF2BQ00403 316 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 TMEM259Q4ZIN3 620 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 ZC2HC1CQ53FD0 456 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 UTP14CQ5TAP6 766 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 FAM186BQ8IYM0 893 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 CEP170P1Q96L14 293 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 FAM207AQ9NSI2 230 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 PLAGL2Q9UPG8 496 aa11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-203ENST00000448935 GTPBP10A4D1E9 387 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 RASSF10A6NK89 507 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 HAX1O00165 279 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 CLIC2O15247 247 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 AKAP3O75969 853 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 NDUFA10O95299 355 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 GCLCP48506 637 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 NCKAP1LP55160 1127 aa11.57□□□□□ -0.56
VIPAS39-203ENST00000448935 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms