RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 IRS1P35568 1242 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 FAM189BP81408 668 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 SPOUT1Q5T280 376 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 METTL13Q8N6R0 699 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 FAM167AQ96KS9 214 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 UIMC1Q96RL1 719 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 KCNH6Q9H252 994 aa15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 ELAC1Q9H777 363 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-213ENST00000448520 PIEZO1Q92508 2521 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 MGEA5O60502 916 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 TBX10O75333 385 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 DDIT3P35638 169 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 COASYQ13057 564 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 CLUL1Q15846 466 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 PRR16Q569H4 304 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 FBXO18Q8NFZ0 1043 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 MICAL1Q8TDZ2 1067 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 CDCA3Q99618 268 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 ATP6V0A4Q9HBG4 840 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 SH3GLB2Q9NR46 395 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 TMEM161AQ9NX61 479 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 MTMR6Q9Y217 621 aa15.47■□□□□ 0.07
PDLIM2-213ENST00000448520 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 FAM205CA6NFA0 338 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 TBKBP1A7MCY6 615 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 H3BQV1 296 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 LINC01565O15544 149 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 GPR32O75388 356 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 CSPG5O95196 566 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 C22orf31O95567 290 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 GATMP50440 423 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 USP11P51784 963 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 NR5A1Q13285 461 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 TRIM29Q14134 588 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 KIZQ2M2Z5 673 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 HERC4Q5GLZ8 1057 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 CCDC148Q8NFR7 591 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 TLE6Q9H808 572 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 GABBR1Q9UBS5 961 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 PUF60Q9UHX1 559 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 SAMM50Q9Y512 469 aa15.46■□□□□ 0.07
PDLIM2-213ENST00000448520 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 BTBD18B2RXH4 712 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 HOXA2O43364 376 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 STX6O43752 255 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 ZSCAN20P17040 1043 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 IBSPP21815 317 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 NRIP1P48552 1158 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 DSC3Q14574 896 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 FAM102BQ5T8I3 360 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 EFCAB12Q6NXP0 572 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 ADGRD2Q7Z7M1 963 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 RBM23Q86U06 439 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 FERMT3Q86UX7 667 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 FAM228AQ86W67 206 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 DIS3L2Q8IYB7 885 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 BLIDQ8IZY5 108 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 SMRP1Q8NCR6 262 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 MFSD14AQ96MC6 490 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 OSMRQ99650 979 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 TLR9Q9NR96 1032 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 TYW1Q9NV66 732 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 CLEC1BQ9P126 229 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 PCDHA4Q9UN74 947 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 LZTS1Q9Y250 596 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 ZDHHC9Q9Y397 364 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 KIAA1671Q9BY89 1806 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 WDR81Q562E7 1941 aa15.45■□□□□ 0.06
PDLIM2-213ENST00000448520 FGF18O76093 207 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 VTNP04004 478 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 XBP1P17861 261 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 LAG3P18627 525 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 NLRP11P59045 1033 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 CDC42EP1Q00587 391 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 PLCB3Q01970 1234 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 EARS2Q5JPH6 523 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 MCTP1Q6DN14 999 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 TRMT1LQ7Z2T5 733 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 RNF135Q8IUD6 432 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 THNSL1Q8IYQ7 743 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 COLGALT1Q8NBJ5 622 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 RIT2Q99578 217 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 TMEM117Q9H0C3 514 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 DISC1Q9NRI5 854 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 AKT3Q9Y243 479 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 C5orf42Q9H799 3197 aa15.44■□□□□ 0.06
PDLIM2-213ENST00000448520 M0R2N6 131 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 PDCP20941 246 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 EIF4BP23588 611 aaKnown RBP15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 SFNP31947 248 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 KRT2P35908 639 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 DAGLBQ8NCG7 672 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 EDAQ92838 391 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms