RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 C6orf229H3BNL8 230 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 LSM1O15116 133 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 USP17L8P0C7I0 530 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 GABPAQ06546 454 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 LRRC41Q15345 812 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 CC2D2BQ6DHV5 1058 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 MIEF2Q96C03 454 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 ISCA1Q9BUE6 129 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 BRD8Q9H0E9 1235 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 RTL9Q8NET4 1388 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 WDR47O94967 919 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 SLC4A1P02730 911 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 RPN1P04843 607 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 ZCWPW2Q504Y3 356 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CEP78Q5JTW2 689 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 BSPRYQ5W0U4 402 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 RNF207Q6ZRF8 634 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CDH24Q86UP0 819 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 HEATR4Q86WZ0 1026 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CCDC103Q8IW40 242 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 SLC44A5Q8NCS7 719 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 TGFBRAP1Q8WUH2 860 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 MTA3Q9BTC8 594 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 FOXP1Q9H334 677 aaPredicted RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 ATP6V0A4Q9HBG4 840 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 GPCPD1Q9NPB8 672 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 KDM6AO15550 1401 aaPredicted RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 EXOC1LA0A1B0GW35 172 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 S100A5P33763 92 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 GARSP41250 739 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 SMTNP53814 917 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 FAM81AQ8TBF8 368 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 SMCR8Q8TEV9 937 aaPredicted RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 HDAC11Q96DB2 347 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 BTBD7Q9P203 1132 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 SUCLA2Q9P2R7 463 aaPredicted RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 ZNF652Q9Y2D9 606 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 USP17L3A6NCW0 530 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 USP17L4A6NCW7 530 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 ANP32DO95626 131 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 ABL1P00519 1130 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 S100A9P06702 114 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 MDH1P40925 334 aaKnown RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 VSNL1P62760 191 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
SMC6-207ENST00000448223 KRT81Q14533 505 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 DDB1Q16531 1140 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 DAB2IPQ5VWQ8 1189 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 NFRKBQ6P4R8 1299 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 USP17L1Q7RTZ2 530 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 RNF217Q8TC41 542 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CALML6Q8TD86 181 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 CDKL2Q92772 493 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 GRAMD1AQ96CP6 724 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 PBKQ96KB5 322 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 VIPAS39Q9H9C1 493 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 ZBTB21Q9ULJ3 1066 aa9.86□□□□□ -0.83
SMC6-207ENST00000448223 SERPINB2P05120 415 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 BTKQ06187 659 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 LRRC8BQ6P9F7 803 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 TRIM65Q6PJ69 517 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 CATSPER3Q86XQ3 398 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 NOA1Q8NC60 698 aaKnown RBP9.85□□□□□ -0.83
SMC6-207ENST00000448223 TRIM8Q9BZR9 551 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 GSTA4O15217 222 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 MFAP3LO75121 409 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 TOM1L1O75674 476 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 SASH3O75995 380 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 VCAM1P19320 739 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 GNA11P29992 359 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 PRDX5P30044 214 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 KRT26Q7Z3Y9 468 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 CRLF3Q8IUI8 442 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 LTN1O94822 1766 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 LIFRP42702 1097 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 KCNJ6P48051 423 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 EVX2Q03828 476 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 FAM43BQ6ZT52 329 aaPredicted RBP9.85□□□□□ -0.83
SMC6-207ENST00000448223 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.85□□□□□ -0.83
SMC6-207ENST00000448223 MROH5Q6ZUA9 1318 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 ZNF185O15231 689 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 PGM1P36871 562 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 VHLP40337 213 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 IRAK1P51617 712 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 PNMA1Q8ND90 353 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 MRPL40Q9NQ50 206 aaKnown RBP9.85□□□□□ -0.83
SMC6-207ENST00000448223 INTS13Q9NVM9 706 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 SLAIN2Q9P270 581 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 ANAPC5Q9UJX4 755 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 WDR17Q8IZU2 1322 aa9.85□□□□□ -0.83
SMC6-207ENST00000448223 TARSL2A2RTX5 802 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 ECEL1O95672 775 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 TNNC2P02585 160 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 PLS1Q14651 629 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms