RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 GOLGA6L22H0YM25 854 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 MAGEB2O15479 319 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TREHO43280 583 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 MAFO75444 373 aaPredicted RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 ZNF202O95125 648 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 PLA2G4BP0C869 781 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 RFC5P40937 340 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 STAT6P42226 847 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 SYKP43405 635 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 SLC12A3P55017 1021 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 MCM6Q14566 821 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 PTGISQ16647 500 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 LRRC26Q2I0M4 334 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 LONRF3Q496Y0 759 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 ANKRD33Q7Z3H0 272 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 FMR1NBQ8N0W7 255 aaPredicted RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TATDN2Q93075 761 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 DHX58Q96C10 678 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 ZBTB10Q96DT7 871 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TOX2Q96NM4 488 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 PYM1Q9BRP8 204 aaKnown RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TRPV6Q9H1D0 765 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 CUEDC2Q9H467 287 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 DHX33Q9H6R0 707 aaKnown RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 PDLIM7Q9NR12 457 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TRMT13Q9NUP7 481 aaKnown RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 STK17AQ9UEE5 414 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 USP25Q9UHP3 1055 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 TCHHQ07283 1943 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 MROH7Q68CQ1 1323 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 IGKV6-21A0A0C4DH24 114 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 B4GALT4O60513 344 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 PQBP1O60828 265 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 DGAT1O75907 488 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 C22orf31O95567 290 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 CD4P01730 458 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SSBP05455 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SLFN14P0C7P3 912 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 LIG1P18858 919 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 CYP11B2P19099 503 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 MCM4P33991 863 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 TLE2Q04725 743 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 FAM160A1Q05DH4 1040 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 TRIM60Q495X7 471 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 EFCAB12Q6NXP0 572 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 RUFY4Q6ZNE9 571 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 C1orf186Q6ZWK4 172 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SERINC5Q86VE9 423 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 FAM126BQ8IXS8 530 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 METTL13Q8N6R0 699 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 RETREG2Q8NC44 543 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 LARP4BQ92615 738 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 CCDC43Q96MW1 224 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 MTRQ99707 1265 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SUGCTQ9HAC7 445 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 KBTBD4Q9NVX7 518 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 MKI67P46013 3256 aaKnown RBP8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 SCN10AQ9Y5Y9 1956 aa8.39□□□□□ -1.07
AC004540.1-206ENST00000448056 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 SMIM35A0A1B0GVV1 85 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 USO1O60763 962 aaKnown RBP8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 NR1I2O75469 434 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 CYP2C9P11712 490 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 TMOD1P28289 359 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 DNM2P50570 870 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 POLGP54098 1239 aaPredicted RBP8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 RTP1P59025 263 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 AMPD3Q01432 767 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 PTK7Q13308 1070 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 EMC2Q15006 297 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 IER5Q5VY09 327 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 TAF2Q6P1X5 1199 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 RPAINQ86UA6 219 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 CEP57L1Q8IYX8 460 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 NME8Q8N427 588 aa8.38□□□□□ -1.07
AC004540.1-206ENST00000448056 LRRC71Q8N4P6 559 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms