RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PAGE1O75459 146 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 EYA4O95677 639 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 C6orf222P0C671 652 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-205ENST00000447267 FAM87AP0C7U9 286 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 NTF4P34130 210 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 KCNJ6P48051 423 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 JAG1P78504 1218 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 ADAM15Q13444 863 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 CCDC6Q16204 474 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 EPC2Q52LR7 807 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 SULF2Q8IWU5 870 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 TMEFF1Q8IYR6 380 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-205ENST00000447267 MSLNLQ96KJ4 702 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 RAD9AQ99638 391 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-205ENST00000447267 TSPYL4Q9UJ04 414 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 USP15Q9Y4E8 981 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-205ENST00000447267 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.29□□□□□ -1.4
SDCBP-205ENST00000447267 GRIN2DO15399 1336 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 PFKMP08237 780 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 AKR1A1P14550 325 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 MAPK1P28482 360 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 NDUFV1P49821 464 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 WDR5P61964 334 aaKnown RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 BEX3Q00994 111 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 SHROOM1Q2M3G4 852 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 ZC3H12AQ5D1E8 599 aaKnown RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 SMYD4Q8IYR2 804 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 PLD6Q8N2A8 252 aaKnown RBP6.28□□□□□ -1.4
SDCBP-205ENST00000447267 SLC43A3Q8NBI5 491 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 CCDC191Q8NCU4 936 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 GRIN3AQ8TCU5 1115 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 KCNB2Q92953 911 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 OSBPL7Q9BZF2 842 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 CLEC1BQ9P126 229 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 AKAP2Q9Y2D5 859 aa6.28□□□□□ -1.4
SDCBP-205ENST00000447267 PHIPQ8WWQ0 1821 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 SPEF2Q9C093 1822 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 H3BNC9 293 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ENC1O14682 589 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 NCK2O43639 380 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 PGK2P07205 417 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 SP9P0CG40 484 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 PLA2G2AP14555 144 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ITGB5P18084 799 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 AOC1P19801 751 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ARNTP27540 789 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 CAP2P40123 477 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 CD96P40200 585 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 PSMC6P62333 389 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 BNIP3Q12983 259 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ITGA7Q13683 1181 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 CNGB1Q14028 1251 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-205ENST00000447267 TCTN1Q2MV58 587 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 CXCL17Q6UXB2 119 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 TP53INP2Q8IXH6 220 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 GPBAR1Q8TDU6 330 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ISL2Q96A47 359 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 MOV10L1Q9BXT6 1211 aaKnown RBP6.27□□□□□ -1.41
SDCBP-205ENST00000447267 ATXN3LQ9H3M9 355 aa6.27□□□□□ -1.41
SDCBP-205ENST00000447267 DDX4Q9NQI0 724 aaKnown RBP6.27□□□□□ -1.41
SDCBP-205ENST00000447267 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 HECTD1Q9ULT8 2610 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 ADCY6O43306 1168 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 FBXO24O75426 580 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 GJB5O95377 273 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 TOP3BO95985 862 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 ASGR2P07307 311 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 SLFN14P0C7P3 912 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 ERCC3P19447 782 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 BMP6P22004 513 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PLCB3Q01970 1234 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 CYP27A1Q02318 531 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 SRSF1Q07955 248 aaKnown RBP eCLIP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PICALMQ13492 652 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 FAM214BQ7L5A3 538 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PCSK9Q8NBP7 692 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 SMRP1Q8NCR6 262 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 ZCCHC14Q8WYQ9 949 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 TINF2Q9BSI4 451 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 DUSP23Q9BVJ7 150 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PIDD1Q9HB75 910 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 AS3MTQ9HBK9 375 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 TRMT13Q9NUP7 481 aaKnown RBP6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PLAGL2Q9UPG8 496 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 PTPRFP10586 1907 aa6.26□□□□□ -1.41
SDCBP-205ENST00000447267 SMCHD1A6NHR9 2005 aa6.25□□□□□ -1.41
SDCBP-205ENST00000447267 CTAGE5O15320 804 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms