RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ANKFY1Q9P2R3 1169 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 PLXNA4Q9HCM2 1894 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 MYO5AQ9Y4I1 1855 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 ADAMTS20P59510 1910 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 TGFBR3LH3BV60 316 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 HOXD8P13378 290 aaPredicted RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 ARID4AP29374 1257 aaPredicted RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 IL15P40933 162 aaPredicted RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 DYNLL1P63167 89 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 ICA1Q05084 483 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 MVPQ14764 893 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 NKAPLQ5M9Q1 402 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 KIAA1211Q6ZU35 1233 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 EEPD1Q7L9B9 569 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 ZBTB44Q8NCP5 570 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 NELL1Q92832 810 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 ZNF689Q96CS4 500 aaPredicted RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 CDCA3Q99618 268 aaPredicted RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 SLF1Q9BQI6 1058 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 TLE6Q9H808 572 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 LRP2BPQ9P2M1 347 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 CDH22Q9UJ99 828 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 DUSP12Q9UNI6 340 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 SMG5Q9UPR3 1016 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 WASF3Q9UPY6 502 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 PCDHGA2Q9Y5H1 932 aa3.95□□□□□ -1.78
PMS1-215ENST00000447232 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.95□□□□□ -1.78
PMS1-215ENST00000447232 AKAP13Q12802 2813 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 DENND4AQ7Z401 1863 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 MPHOSPH10O00566 681 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 TM4SF5O14894 197 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 IGSF3O75054 1194 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 VAMP4O75379 141 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 HOXB8P17481 243 aaPredicted RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 CCINQ13939 588 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 CCDC27Q2M243 656 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 FAM83BQ5T0W9 1011 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 OR6J1Q8NGC5 347 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 RASGRP4Q8TDF6 673 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 POF1BQ8WVV4 589 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 MAP4K1Q92918 833 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 NECTIN4Q96NY8 510 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 HNRNPABQ99729 332 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 WDR11Q9BZH6 1224 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 SLC38A10Q9HBR0 1119 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 A1CFQ9NQ94 594 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 TPSG1Q9NRR2 321 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 GTF2IRD1Q9UHL9 959 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 SLC6A14Q9UN76 642 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 LAMA5O15230 3695 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 IL16Q14005 1332 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 PATJQ8NI35 1801 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 MYH8P13535 1937 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 HECTD1Q9ULT8 2610 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 APAF1O14727 1248 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 PER2O15055 1255 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 WEE1P30291 646 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 OAZ1P54368 228 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 BRDTQ58F21 947 aaPredicted RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 SLC4A10Q6U841 1118 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 CPXCR1Q8N123 301 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 PRPF38AQ8NAV1 312 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 KAT2BQ92831 832 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 GATA6Q92908 595 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 BBC3Q96PG8 261 aaPredicted RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 RAVER2Q9HCJ3 691 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 DNAJB12Q9NXW2 375 aaKnown RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 KLK14Q9P0G3 267 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 WNT16Q9UBV4 365 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 USTQ9Y2C2 406 aa3.94□□□□□ -1.78
PMS1-215ENST00000447232 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.94□□□□□ -1.78
PMS1-215ENST00000447232 MYO18BQ8IUG5 2567 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 TBC1D4O60343 1298 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 LRP3O75074 770 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 GLULP15104 373 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 AKR1B1P15121 316 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 TECP42680 631 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 AFF1P51825 1210 aaKnown RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 TDGQ13569 410 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 PHLDB3Q6NSJ2 640 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 TDRD5Q8NAT2 981 aaKnown RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 KLHL23Q8NBE8 558 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 NUDT8Q8WV74 236 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 SEPT8Q92599 483 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 OSBPL7Q9BZF2 842 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 USP44Q9H0E7 712 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 ADAM7Q9H2U9 754 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 ACAD9Q9H845 621 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 NAGPAQ9UK23 515 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 FBXO4Q9UKT5 387 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 TTC3P53804 2025 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 RAD50Q92878 1312 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 A0A0A0MRY4 1105 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 RSPH10B2B2RC85 870 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 E9PSI1 815 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 NKRFO15226 690 aaKnown RBP eCLIP3.93□□□□□ -1.78
PMS1-215ENST00000447232 DCNP07585 359 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms