RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 AGGF1Q8N302 714 aaeCLIP14.23□□□□□ -0.132e-6■■■■■ 27.8
PRDM15-206ENST00000447016 CNKSR1Q969H4 720 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 SMYD3Q9H7B4 428 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 TMEM2Q9UHN6 1383 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 ASAP2O43150 1006 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 CD58P19256 250 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 VSNL1P62760 191 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 CC2D2BQ6DHV5 1058 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 SYDE1Q6ZW31 735 aaPredicted RBP14.23□□□□□ -0.13
PRDM15-206ENST00000447016 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 GSPT2Q8IYD1 628 aaKnown RBP14.23□□□□□ -0.13
PRDM15-206ENST00000447016 RAD54LQ92698 747 aa14.23□□□□□ -0.13
PRDM15-206ENST00000447016 ATP10AO60312 1499 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 K7ERI5 159 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 KRT7P08729 469 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 EPHB1P54762 984 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SPATA21Q7Z572 469 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 THOC1Q96FV9 657 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 HEXIM2Q96MH2 286 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 TRIM49BA6NDI0 452 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 EIF3HO15372 352 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 NOP14P78316 857 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 PRKG1Q13976 671 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 NAA30Q147X3 362 aaPredicted RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 TRIM72Q6ZMU5 477 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 PPCSQ9HAB8 311 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SLC13A4Q9UKG4 626 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SNX12Q9UMY4 172 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SMG5Q9UPR3 1016 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 AKT3Q9Y243 479 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SYF2O95926 243 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 KCNB1Q14721 858 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ENOSF1Q7L5Y1 443 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 NUDCD3Q8IVD9 361 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 MSTO1Q9BUK6 570 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ZWILCHQ9H900 591 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 DCTN4Q9UJW0 460 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ZFXP17010 805 aaPredicted RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 SLC16A2P36021 539 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 JAK3P52333 1124 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 TMEM259Q4ZIN3 620 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 PDXDC1Q6P996 788 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 PRPF38AQ8NAV1 312 aaKnown RBP14.22□□□□□ -0.13
PRDM15-206ENST00000447016 OR9Q1Q8NGQ5 310 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 MTRQ99707 1265 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
PRDM15-206ENST00000447016 ESYT3A0FGR9 886 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 KCNA4P22459 653 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 ANKRD7Q92527 254 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 MTBPQ96DY7 904 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 DDX56Q9NY93 547 aaKnown RBP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 KDM5CP41229 1560 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 TTC37Q6PGP7 1564 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 TMEM247A6NEH6 219 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 H3BRJ5 948 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 STXBP3O00186 592 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 BBOX1O75936 387 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 PLEKHA8P1O95397 391 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 UBXN2AP68543 259 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 CCNA1P78396 465 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 EFTUD2Q15029 972 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 CCDC137Q6PK04 289 aaKnown RBP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 RHOT1Q8IXI2 618 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 STAG2Q8N3U4 1231 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 TEX9Q8N6V9 391 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 PI4KBQ9UBF8 816 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 TEKT2Q9UIF3 430 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 TBXAS1P24557 533 aaPredicted RBP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 SOX5P35711 763 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 KNOP1Q1ED39 458 aaKnown RBP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
PRDM15-206ENST00000447016 IP6K2Q9UHH9 426 aa14.21□□□□□ -0.13
PRDM15-206ENST00000447016 ATP1A1P05023 1023 aaKnown RBP14.21□□□□□ -0.14
PRDM15-206ENST00000447016 AARSP49588 968 aaKnown RBP eCLIP14.21□□□□□ -0.14
PRDM15-206ENST00000447016 AP1B1Q10567 949 aa14.21□□□□□ -0.14
PRDM15-206ENST00000447016 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.14
PRDM15-206ENST00000447016 KIRREL3Q8IZU9 778 aa14.21□□□□□ -0.14
PRDM15-206ENST00000447016 MAGEB5Q9BZ81 275 aa14.21□□□□□ -0.14
PRDM15-206ENST00000447016 STX18Q9P2W9 335 aaKnown RBP14.21□□□□□ -0.14
PRDM15-206ENST00000447016 LIMA1Q9UHB6 759 aaKnown RBP14.21□□□□□ -0.14
PRDM15-206ENST00000447016 TEX33O43247 280 aa14.2□□□□□ -0.14
PRDM15-206ENST00000447016 COASYQ13057 564 aa14.2□□□□□ -0.14
PRDM15-206ENST00000447016 ALX1Q15699 326 aa14.2□□□□□ -0.14
PRDM15-206ENST00000447016 UBE2SQ16763 222 aa14.2□□□□□ -0.14
PRDM15-206ENST00000447016 NAALADL2Q58DX5 795 aa14.2□□□□□ -0.14
PRDM15-206ENST00000447016 NCLNQ969V3 563 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms