RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 GBP6Q6ZN66 633 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 SLC9A9Q8IVB4 645 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 FAM133AQ8N9E0 248 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 CDHR1Q96JP9 859 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 TIPINQ9BVW5 301 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 AIPL1Q9NZN9 384 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 SLC9A2Q9UBY0 812 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 AJAP1Q9UKB5 411 aaPredicted RBP19.1■□□□□ 0.65
SMC6-206ENST00000446852 FRMD4BQ9Y2L6 1034 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 MACROD2A1Z1Q3 448 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 PEX3P56589 373 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 PPATQ06203 517 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 ALCAMQ13740 583 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 GNPTABQ3T906 1256 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 FAM102BQ5T8I3 360 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 RSRC2Q7L4I2 434 aaKnown RBP19.1■□□□□ 0.65
SMC6-206ENST00000446852 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 RIOX2Q8IUF8 465 aa19.1■□□□□ 0.65
SMC6-206ENST00000446852 CCDC60Q8IWA6 550 aaPredicted RBP19.1■□□□□ 0.65
SMC6-206ENST00000446852 GTPBP10A4D1E9 387 aaKnown RBP19.09■□□□□ 0.65
SMC6-206ENST00000446852 ENC1O14682 589 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 SLC16A4O15374 487 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 NCKAP1LP55160 1127 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ACTR2P61160 394 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 GTF2BQ00403 316 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ARID5AQ03989 594 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 SWSAP1Q6NVH7 229 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 PROCA1Q8NCQ7 364 aaPredicted RBP19.09■□□□□ 0.65
SMC6-206ENST00000446852 EHBP1Q8NDI1 1231 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 DNERQ8NFT8 737 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 IWS1Q96ST2 819 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ST6GALNAC4Q9H4F1 302 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 RBAK-RBAKDNI3L0D1 243 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 TRIM49P0CI25 452 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 TRIM49CP0CI26 452 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ERO1BQ86YB8 467 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ATP6V0A1Q93050 837 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
SMC6-206ENST00000446852 ACCSQ96QU6 501 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 ARID3AQ99856 593 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 TSGA10Q9BZW7 698 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 TMEM206Q9H813 350 aa19.09■□□□□ 0.65
SMC6-206ENST00000446852 EXOC3O60645 756 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 ATP1A1P05023 1023 aaKnown RBP19.08■□□□□ 0.65
SMC6-206ENST00000446852 PSAPP07602 524 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 FMO5P49326 533 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 STXBP2Q15833 593 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 ABHD15Q6UXT9 468 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 ANKRD13AQ8IZ07 590 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 R3HDMLQ9H3Y0 253 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 HDAC6Q9UBN7 1215 aa19.08■□□□□ 0.65
SMC6-206ENST00000446852 PFASO15067 1338 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 SPDYE5A6NIY4 337 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 ALDH5A1P51649 535 aaPredicted RBP19.08■□□□□ 0.64
SMC6-206ENST00000446852 SOX10P56693 466 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 TUBB2AQ13885 445 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 ASIC2Q16515 512 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 CBWD6Q4V339 395 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 CBWD3Q5JTY5 395 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 CBWD5Q5RIA9 395 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 SRGAP1Q7Z6B7 1085 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 RDH13Q8NBN7 331 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 ZNF526Q8TF50 670 aaPredicted RBP19.08■□□□□ 0.64
SMC6-206ENST00000446852 SECISBP2LQ93073 1101 aaKnown RBP19.08■□□□□ 0.64
SMC6-206ENST00000446852 CEP170P1Q96L14 293 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 CBWD1Q9BRT8 395 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 TUBB2BQ9BVA1 445 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
SMC6-206ENST00000446852 EPC1Q9H2F5 836 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 PCIF1Q9H4Z3 704 aa19.08■□□□□ 0.64
SMC6-206ENST00000446852 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.64
SMC6-206ENST00000446852 H2AFXP16104 143 aaPredicted RBP19.07■□□□□ 0.64
SMC6-206ENST00000446852 EPHX2P34913 555 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 MAGEA1P43355 309 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
SMC6-206ENST00000446852 MYBPC2Q14324 1141 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 GJB7Q6PEY0 223 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
SMC6-206ENST00000446852 IRF2BP2Q7Z5L9 587 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 KIFC3Q9BVG8 833 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 MLXIPQ9HAP2 919 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 FBXO40Q9UH90 709 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 FBXL5Q9UKA1 691 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 MYO6Q9UM54 1294 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 CAPN6Q9Y6Q1 641 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 EIF3JO75822 258 aaKnown RBP19.07■□□□□ 0.64
SMC6-206ENST00000446852 CNMDO75829 334 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 PRKCEQ02156 737 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 KLHL30Q0D2K2 578 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 BFSP1Q12934 665 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 PPP2R5AQ15172 486 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 ENOX2Q16206 610 aaKnown RBP19.07■□□□□ 0.64
SMC6-206ENST00000446852 TEX35Q5T0J7 233 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 OTUD6AQ7L8S5 288 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 TRAPPC11Q7Z392 1133 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 ZSWIM2Q8NEG5 633 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 TMEM174Q8WUU8 243 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms