RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 TBCAO75347 108 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 LYPLA2O95372 231 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 CST5P28325 142 aaPredicted RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 CASP5P51878 434 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 DPYDQ12882 1025 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 COASYQ13057 564 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 MAPK7Q13164 816 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 TARBP2Q15633 366 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 ZSCAN23Q3MJ62 389 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 UMODL1Q5DID0 1318 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 ZNF484Q5JVG2 852 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 CDR2LQ86X02 465 aaPredicted RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 NOC3LQ8WTT2 800 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 PRPF31Q8WWY3 499 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 SLC7A3Q8WY07 619 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 SMARCE1Q969G3 411 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 DNAJC19Q96DA6 116 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 FAM167AQ96KS9 214 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 KATNAL1Q9BW62 490 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 C11orf49Q9H6J7 331 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 KBTBD4Q9NVX7 518 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
SF3A3P1-201ENST00000446317 A0A0U1RQG5 324 aaPredicted RBP8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 TISP43B9A030 160 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 KLRC4O43908 158 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 GLRA2P23416 452 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 THPOP40225 353 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 RTP1P59025 263 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 KCNA1Q09470 495 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 KLHL40Q2TBA0 621 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 POTEHQ6S545 545 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 DHX38Q92620 1227 aaKnown RBP8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 EEF2KMTQ96G04 330 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 CTAGE1Q96RT6 745 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 OSMRQ99650 979 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 C7orf25Q9BPX7 421 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
SF3A3P1-201ENST00000446317 ADGRA3Q8IWK6 1321 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 A0A087WZ62 844 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 K7ENM7 598 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 ARVCFO00192 962 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 KPNA6O60684 536 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 GCNT3O95395 438 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 EDN1P05305 212 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 HARSP12081 509 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 CD44P16070 742 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 SYN1P17600 705 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 BMP6P22004 513 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 CCL23P55773 120 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 STX17P56962 302 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 NLRP11P59045 1033 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 TLE2Q04725 743 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 LAMTOR4Q0VGL1 99 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 CAPSQ13938 189 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 HSP90AA4PQ58FG1 418 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 KIAA0319LQ8IZA0 1049 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 RNF149Q8NC42 400 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 SCLYQ96I15 445 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 FDXACB1Q9BRP7 624 aaPredicted RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 DHX33Q9H6R0 707 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 MRPL44Q9H9J2 332 aaKnown RBP8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 ARID2Q68CP9 1835 aa8.36□□□□□ -1.07
SF3A3P1-201ENST00000446317 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 B4GALT5O43286 388 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 DGAT1O75907 488 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 CYP2C18P33260 490 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 ARL2P36404 184 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 RFC5P40937 340 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 NPTX2P47972 431 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 SLC26A2P50443 739 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 NKX3-2P78367 333 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 AMPD3Q01432 767 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 STK4Q13043 487 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 DPCR1Q3MIW9 517 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 C11orf57Q6ZUT1 292 aaPredicted RBP8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 NECAB2Q7Z6G3 386 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 CCDC65Q8IXS2 484 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 KIAA0895Q8NCT3 520 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 DEPTORQ8TB45 409 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 PSPC1Q8WXF1 523 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms