RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 TREHO43280 583 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 GNAT1P11488 350 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 IDEP14735 1019 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-203ENST00000444983 COASYQ13057 564 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 IER5Q5VY09 327 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 GDF6Q6KF10 455 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-203ENST00000444983 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 TRIML1Q8N9V2 468 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 RETREG2Q8NC44 543 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 NTPCRQ9BSD7 190 aaKnown RBP16.74■□□□□ 0.27
CCNE1-203ENST00000444983 SEZ6LQ9BYH1 1024 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 PARVGQ9HBI0 331 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 OLFML3Q9NRN5 406 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
CCNE1-203ENST00000444983 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
CCNE1-203ENST00000444983 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 SYCE3A1L190 88 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 PLS3P13797 630 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 GAP43P17677 238 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 KIAA0319LQ8IZA0 1049 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 LRRC71Q8N4P6 559 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 TCP11Q8WWU5 503 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 BSNDQ8WZ55 320 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 TMEM106CQ9BVX2 250 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 RMND1Q9NWS8 449 aa16.73■□□□□ 0.27
CCNE1-203ENST00000444983 ARVCFO00192 962 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 TBCAO75347 108 aaKnown RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 GLRA2P23416 452 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 STK4Q13043 487 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 PSMD2Q13200 908 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 PRPF31Q8WWY3 499 aaKnown RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 KCNN1Q92952 543 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 HPS3Q969F9 1004 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 POLR3FQ9H1D9 316 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 SEL1LQ9UBV2 794 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 FAM13AO94988 1023 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 CLCN3P51790 818 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 SNX17Q15036 470 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 C1orf53Q5VUE5 145 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 RUFY4Q6ZNE9 571 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 ASAP3Q8TDY4 903 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 DIS3LQ8TF46 1054 aaKnown RBP16.72■□□□□ 0.27
CCNE1-203ENST00000444983 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 VTI1AQ96AJ9 217 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
CCNE1-203ENST00000444983 BIN1O00499 593 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 MAPTP10636 758 aaKnown RBP16.71■□□□□ 0.27
CCNE1-203ENST00000444983 CYP2C9P11712 490 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 TMOD1P28289 359 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 NPTX2P47972 431 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 MXD4Q14582 209 aaPredicted RBP16.71■□□□□ 0.27
CCNE1-203ENST00000444983 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 FAM47CQ5HY64 1035 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 ODR4Q5SWX8 454 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 ZNF720Q7Z2F6 126 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 RPAINQ86UA6 219 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 MYCT1Q8N699 235 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
CCNE1-203ENST00000444983 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 SENP6Q9GZR1 1112 aaPredicted RBP16.71■□□□□ 0.27
CCNE1-203ENST00000444983 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 EXOC1Q9NV70 894 aa16.71■□□□□ 0.27
CCNE1-203ENST00000444983 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
CCNE1-203ENST00000444983 ASAP2O43150 1006 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 PPP1R37O75864 691 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 DNM2P50570 870 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 ZNF445P59923 1031 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 FAM26FQ5R3K3 315 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 ISM2Q6H9L7 571 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 EPM2AIP1Q7L775 607 aaPredicted RBP16.7■□□□□ 0.26
CCNE1-203ENST00000444983 UBE2Q1Q7Z7E8 422 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
CCNE1-203ENST00000444983 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
CCNE1-203ENST00000444983 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
CCNE1-203ENST00000444983 NAMPTP43490 491 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 CASP5P51878 434 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 PEX3P56589 373 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 NLRP12P59046 1061 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 POU5F1BQ06416 359 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 CAPSQ13938 189 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 PTGISQ16647 500 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 COL13A1Q5TAT6 717 aaPredicted RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 SLC39A5Q6ZMH5 540 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms