RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 LNX1Q8TBB1 728 aaPredicted RBP23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 ZNF473Q8WTR7 871 aaKnown RBP23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 CTNNBL1Q8WYA6 563 aaPredicted RBP23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 RGL1Q9NZL6 768 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 FAM196BA6NMK8 535 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 OPLAHO14841 1288 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 HMGB2P26583 209 aaKnown RBP23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 PPP2R5CQ13362 524 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 GJB7Q6PEY0 223 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 OTOP1Q7RTM1 612 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 OTUD6BQ8N6M0 293 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 CCT8L2Q96SF2 557 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 RAB17Q9H0T7 212 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 AMACRQ9UHK6 382 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 FRMD4BQ9Y2L6 1034 aa23.59■■□□□ 1.37
SKIDA1-201ENST00000444772 ICE2Q659A1 982 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 SUGP1Q8IWZ8 645 aaKnown RBP23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 MYCBPAPQ8TBZ2 947 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 SYT11Q9BT88 431 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 CARD9Q9H257 536 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 DNAJC12Q9UKB3 198 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 ZNF131P52739 623 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 DRAP1Q14919 205 aaPredicted RBP23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 MMS22LQ6ZRQ5 1243 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 OLIG1Q8TAK6 271 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 SLC35G2Q8TBE7 412 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 QTRT2Q9H974 415 aaKnown RBP23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 DMAC2Q9NW81 257 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 ODF2LQ9ULJ1 636 aa23.58■■□□□ 1.37
SKIDA1-201ENST00000444772 FRMPD4Q14CM0 1322 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 SLITRK3O94933 977 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 TRIM37O94972 964 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 SNAP25P60880 206 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 PPATQ06203 517 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 SHROOM1Q2M3G4 852 aaPredicted RBP23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 SH3BP5LQ7L8J4 393 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 TMC3Q7Z5M5 1100 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 DDX42Q86XP3 938 aaKnown RBP eCLIP23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 VGLL3A8MV65 326 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 DAPK3O43293 454 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 BUB1BO60566 1050 aaPredicted RBP23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 ITGA4P13612 1032 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 HOXA13P31271 388 aaPredicted RBP23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 POU5F1Q01860 360 aaKnown RBP23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 ZNF720Q7Z2F6 126 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 DNAAF5Q86Y56 855 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 GLYCTKQ8IVS8 523 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 CYP2W1Q8TAV3 490 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 VTI1AQ96AJ9 217 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 NEUROG2Q9H2A3 272 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 ANKRD31Q8N7Z5 1873 aa23.57■■□□□ 1.36
SKIDA1-201ENST00000444772 PSMD10O75832 226 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 NMT1P30419 496 aaKnown RBP23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 MYBPC2Q14324 1141 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 LRCH2Q5VUJ6 765 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 UBLCP1Q8WVY7 318 aaPredicted RBP23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 APEX2Q9UBZ4 518 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 GOLGA6L10A0A0M3HER8 536 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 ONECUT3O60422 494 aaPredicted RBP23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 FSBPO95073 299 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 EIF3BP55884 814 aaKnown RBP23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 PTENP60484 403 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 CTTNQ14247 550 aaKnown RBP23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 TPH2Q8IWU9 490 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 PIGOQ8TEQ8 1089 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 SLC12A6Q9UHW9 1150 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 TTI1O43156 1089 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 FGGP02679 453 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 CACNB3P54284 484 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 SLC9A9Q8IVB4 645 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 SLC5A5Q92911 643 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 NACC1Q96RE7 527 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 CENPHQ9H3R5 247 aa23.56■■□□□ 1.36
SKIDA1-201ENST00000444772 NRXN2Q9P2S2 1712 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 SFI1A8K8P3 1242 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 MYO1FO00160 1098 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 HPDP32754 393 aaPredicted RBP23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 USP8P40818 1118 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 FAM178BQ8IXR5 827 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 DYDC2Q96IM9 177 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 INTS2Q9H0H0 1204 aaKnown RBP23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 AGPAT3Q9NRZ7 376 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 DDX3YO15523 660 aaKnown RBP23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 PRELPP51888 382 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 HADHBP55084 474 aaKnown RBP23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 PLS1Q14651 629 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 PTPROQ16827 1216 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 RBM26Q5T8P6 1007 aaKnown RBP23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 FIZ1Q96SL8 496 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 EHMT1Q9H9B1 1298 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 PRR12Q9ULL5 1215 aa23.55■■□□□ 1.36
SKIDA1-201ENST00000444772 ANKRD62A6NC57 917 aa23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 E7EVH7 732 aa23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 TNFAIP3P21580 790 aa23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 RBM5P52756 815 aaKnown RBP eCLIP23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 KIAA0825Q8IV33 1275 aa23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 RHOT2Q8IXI1 618 aa23.54■■□□□ 1.36
SKIDA1-201ENST00000444772 GPR88Q9GZN0 384 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms