RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 NUP85Q9BW27 656 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 ATP6V0A4Q9HBG4 840 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 UBN1Q9NPG3 1134 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 ADAM22Q9P0K1 906 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 ADD3Q9UEY8 706 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 EMSYQ7Z589 1322 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PEX19P40855 299 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 FAM117BQ6P1L5 589 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 MAML1Q92585 1016 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 SPATA33Q96N06 139 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 GLI2P10070 1586 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 CLDN3O15551 220 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 GRAP2O75791 330 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 HMBSP08397 361 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 VAMP7P51809 220 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 KIAA1841Q6NSI8 718 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 METTL23Q86XA0 190 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 RNF10Q8N5U6 811 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 CYTH2Q99418 400 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 CDHR2Q9BYE9 1310 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 IPO5O00410 1097 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 OPHN1O60890 802 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 NTSR2O95665 410 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 EPHB4P54760 987 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 CCNA1P78396 465 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 MMEL1Q495T6 779 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 TBC1D1Q86TI0 1168 aaPredicted RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 PANX2Q96RD6 677 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 TRIM51Q9BSJ1 452 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 FBXO28Q9NVF7 368 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 USP20Q9Y2K6 914 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 NOL3O60936 208 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 SPOPLQ6IQ16 392 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 ZKSCAN4Q969J2 545 aaPredicted RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 ATP6V1E2Q96A05 226 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 RRP15Q9Y3B9 282 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 MT-ND3P03897 115 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 STK4Q13043 487 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 RBBP5Q15291 538 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 E2F4Q16254 413 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 KNOP1Q1ED39 458 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 IL31Q6EBC2 164 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 MMP19Q99542 508 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 HOMER3Q9NSC5 361 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 MCF2LO15068 1137 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 FGFR4P22455 802 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 GPC3P51654 580 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 SOX10P56693 466 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 SARNPP82979 210 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 ZC3H18Q86VM9 953 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 GOLGA8RI6L899 631 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 FXR1P51114 621 aaKnown RBP eCLIP8.59□□□□□ -1.03
RIF1-205ENST00000444746 TWF2Q6IBS0 349 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 SCYL3Q8IZE3 742 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 SIK2Q9H0K1 926 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 LIMA1Q9UHB6 759 aaKnown RBP8.59□□□□□ -1.03
RIF1-205ENST00000444746 MOSPD1Q9UJG1 213 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 FEM1BQ9UK73 627 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
RIF1-205ENST00000444746 EXOC1LA0A1B0GW35 172 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 MYMKA6NI61 221 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 HNRNPH2P55795 449 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 PHF20Q9BVI0 1012 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZMYND12Q9H0C1 365 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 HACD3Q9P035 362 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 FEZ2Q9UHY8 353 aaPredicted RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 ASNSP08243 561 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 DPEP1P16444 411 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RASA1P20936 1047 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ARL4AP40617 200 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 NPEPPSP55786 919 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZNF34Q8IZ26 560 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 BTBD6Q96KE9 485 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 NDUFB10O96000 172 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 CDC42BPGQ6DT37 1551 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 A0A0G2JND7 137 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SLC9A1P19634 815 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 TMTC4Q5T4D3 741 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ANGEL2Q5VTE6 544 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 OSBPL5Q9H0X9 879 aaPredicted RBP8.58□□□□□ -1.04
RIF1-205ENST00000444746 ANLNQ9NQW6 1124 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RNF19AQ9NV58 838 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ESYT2A0FGR8 921 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SYNDIG1LA6NDD5 238 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SPDYE2BA6NHP3 402 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 H0Y3Z8 333 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 RASGRF2O14827 1237 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 ZBED1O96006 694 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
RIF1-205ENST00000444746 SATB1Q01826 763 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms