RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 RC3H2Q9HBD1 1191 aaKnown RBP24.96■■□□□ 1.59
LMBR1-211ENST00000444719 RGS18Q9NS28 235 aa24.96■■□□□ 1.59
LMBR1-211ENST00000444719 KIAA1671Q9BY89 1806 aa24.96■■□□□ 1.59
LMBR1-211ENST00000444719 COL4A6Q14031 1691 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 SLITRK3O94933 977 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 YWHABP31946 246 aaKnown RBP24.95■■□□□ 1.58
LMBR1-211ENST00000444719 SARSP49591 514 aaKnown RBP24.95■■□□□ 1.58
LMBR1-211ENST00000444719 GATMP50440 423 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 RHPN2Q8IUC4 686 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 NOSTRINQ8IVI9 506 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 KSR1Q8IVT5 923 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 SAMD11Q96NU1 681 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 PCDHB7Q9Y5E2 793 aa24.95■■□□□ 1.58
LMBR1-211ENST00000444719 FNDC1Q4ZHG4 1894 aaPredicted RBP24.95■■□□□ 1.58
LMBR1-211ENST00000444719 A0A087WZ62 844 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 DLL1O00548 723 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 DARSP14868 501 aaKnown RBP24.94■■□□□ 1.58
LMBR1-211ENST00000444719 CTNNB1P35222 781 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 POLGP54098 1239 aaPredicted RBP24.94■■□□□ 1.58
LMBR1-211ENST00000444719 GPM6BQ13491 265 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 XKR9Q5GH70 373 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 SLC24A5Q71RS6 500 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 OTUD6AQ7L8S5 288 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 ZNF710Q8N1W2 664 aa24.94■■□□□ 1.58
LMBR1-211ENST00000444719 FDXACB1Q9BRP7 624 aaPredicted RBP24.94■■□□□ 1.58
LMBR1-211ENST00000444719 A0A087WWV3 80 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 POTEMA6NI47 508 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 C9IYK1 514 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 DSC3Q14574 896 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 NBR1Q14596 966 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 TTC38Q5R3I4 469 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 SLC7A3Q8WY07 619 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 TMEM143Q96AN5 459 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 HSD17B14Q9BPX1 270 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 JPH2Q9BR39 696 aaPredicted RBP24.93■■□□□ 1.58
LMBR1-211ENST00000444719 GCOM2Q9BZD3 368 aaPredicted RBP24.93■■□□□ 1.58
LMBR1-211ENST00000444719 C1orf112Q9NSG2 853 aa24.93■■□□□ 1.58
LMBR1-211ENST00000444719 TECP42680 631 aa24.92■■□□□ 1.58
LMBR1-211ENST00000444719 NLRP4Q96MN2 994 aa24.92■■□□□ 1.58
LMBR1-211ENST00000444719 DHX33Q9H6R0 707 aaKnown RBP24.92■■□□□ 1.58
LMBR1-211ENST00000444719 LMCD1Q9NZU5 365 aa24.92■■□□□ 1.58
LMBR1-211ENST00000444719 THEGQ9P2T0 379 aa24.92■■□□□ 1.58
LMBR1-211ENST00000444719 MRPL42Q9Y6G3 142 aaKnown RBP24.92■■□□□ 1.58
LMBR1-211ENST00000444719 H3BNC9 293 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 LINC00271P0C7V0 271 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 ZSCAN20P17040 1043 aaPredicted RBP24.91■■□□□ 1.58
LMBR1-211ENST00000444719 GJB2P29033 226 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 BMPR1AP36894 532 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 MCM2P49736 904 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 CDC42EP1Q00587 391 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 FAM102BQ5T8I3 360 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 CMTR2Q8IYT2 770 aaKnown RBP24.91■■□□□ 1.58
LMBR1-211ENST00000444719 IL27Q8NEV9 243 aa24.91■■□□□ 1.58
LMBR1-211ENST00000444719 NOL7Q9UMY1 257 aaKnown RBP24.91■■□□□ 1.58
LMBR1-211ENST00000444719 OR52Z1P0C646 297 aa24.9■■□□□ 1.58
LMBR1-211ENST00000444719 U2AF2P26368 475 aaKnown RBP eCLIP24.9■■□□□ 1.587e-7■■■■□ 20.4
LMBR1-211ENST00000444719 RFC5P40937 340 aa24.9■■□□□ 1.58
LMBR1-211ENST00000444719 MCTP1Q6DN14 999 aa24.9■■□□□ 1.58
LMBR1-211ENST00000444719 CLP1Q92989 425 aaKnown RBP24.9■■□□□ 1.58
LMBR1-211ENST00000444719 KIF3AQ9Y496 699 aa24.9■■□□□ 1.58
LMBR1-211ENST00000444719 TBKBP1A7MCY6 615 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 FGFR1P11362 822 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 FAM189BP81408 668 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 EMC2Q15006 297 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 FAM43BQ6ZT52 329 aaPredicted RBP24.89■■□□□ 1.58
LMBR1-211ENST00000444719 EXOC8Q8IYI6 725 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 NEK9Q8TD19 979 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 PIGOQ8TEQ8 1089 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 PRPF31Q8WWY3 499 aaKnown RBP24.89■■□□□ 1.58
LMBR1-211ENST00000444719 COL25A1Q9BXS0 654 aaPredicted RBP24.89■■□□□ 1.58
LMBR1-211ENST00000444719 BACH2Q9BYV9 841 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 ATP6V0A4Q9HBG4 840 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 PPME1Q9Y570 386 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 COL4A3BPQ9Y5P4 624 aa24.89■■□□□ 1.58
LMBR1-211ENST00000444719 ATG2AQ2TAZ0 1938 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 LYPLA2O95372 231 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 SRGAP2CP0DJJ0 459 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 TOB1P50616 345 aaPredicted RBP24.88■■□□□ 1.57
LMBR1-211ENST00000444719 TFF2Q03403 129 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 ZNF410Q86VK4 478 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 RNF169Q8NCN4 708 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 PSPC1Q8WXF1 523 aaKnown RBP24.88■■□□□ 1.57
LMBR1-211ENST00000444719 MRPL38Q96DV4 380 aaKnown RBP24.88■■□□□ 1.57
LMBR1-211ENST00000444719 RNF216Q9NWF9 866 aaPredicted RBP24.88■■□□□ 1.57
LMBR1-211ENST00000444719 TMEM161AQ9NX61 479 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 RWDD3Q9Y3V2 267 aa24.88■■□□□ 1.57
LMBR1-211ENST00000444719 TCF20Q9UGU0 1960 aaKnown RBP24.87■■□□□ 1.57
LMBR1-211ENST00000444719 C5orf67F2Z3F1 127 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 CSPG5O95196 566 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 RB1P06400 928 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 SPATA31C1P0DKV0 1188 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 TRAPPC10P48553 1259 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 LAMTOR4Q0VGL1 99 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 ORC2Q13416 577 aaPredicted RBP24.87■■□□□ 1.57
LMBR1-211ENST00000444719 PTPROQ16827 1216 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 ATXN2LQ8WWM7 1075 aaKnown RBP24.87■■□□□ 1.57
LMBR1-211ENST00000444719 CCDC43Q96MW1 224 aaKnown RBP24.87■■□□□ 1.57
LMBR1-211ENST00000444719 MTRQ99707 1265 aa24.87■■□□□ 1.57
LMBR1-211ENST00000444719 INO80BQ9C086 356 aaPredicted RBP24.87■■□□□ 1.57
LMBR1-211ENST00000444719 ANKEF1Q9NU02 776 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms