RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 COL4A3BPQ9Y5P4 624 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 ARHGEF35A5YM69 484 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 EIF4BP23588 611 aaKnown RBP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 CDC25AP30304 524 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZRSR1Q15695 479 aaKnown RBP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZNF410Q86VK4 478 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 MYOCDQ8IZQ8 938 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 PRPF31Q8WWY3 499 aaKnown RBP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 CDK5RAP3Q96JB5 506 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 GCOM2Q9BZD3 368 aaPredicted RBP19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 PCDHA11Q9Y5I1 949 aa19.43■□□□□ 0.7
SMARCAL1-209ENST00000444508 GBF1Q92538 1859 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 ASAP2O43150 1006 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 USO1O60763 962 aaKnown RBP19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 F13A1P00488 732 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 DARSP14868 501 aaKnown RBP19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 LONP1P36776 959 aaKnown RBP19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 PBX2P40425 430 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 RABGGTBP53611 331 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 ECM1Q16610 540 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 TIFAQ96CG3 184 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 NLRP4Q96MN2 994 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 ERVK-5Q9HDB9 667 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 ST3GAL5Q9UNP4 418 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 DNM3Q9UQ16 869 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 MYH15Q9Y2K3 1946 aa19.42■□□□□ 0.7
SMARCAL1-209ENST00000444508 PTPRSQ13332 1948 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 TMEM265A0A087WTH1 108 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 A0A087WZ62 844 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 TLL1O43897 1013 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 UBA7P41226 1012 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 LAMTOR4Q0VGL1 99 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 MXD4Q14582 209 aaPredicted RBP19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 PTPAQ15257 358 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 FAM117BQ6P1L5 589 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 PADI6Q6TGC4 694 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 FAM228AQ86W67 206 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 KSR1Q8IVT5 923 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 MCPH1Q8NEM0 835 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 USP28Q96RU2 1077 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 FDXACB1Q9BRP7 624 aaPredicted RBP19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 MMTAG2Q9BU76 263 aaKnown RBP19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 INO80BQ9C086 356 aaPredicted RBP19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 NT5C3AQ9H0P0 336 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 BHMT2Q9H2M3 363 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 XPNPEP1Q9NQW7 623 aa19.41■□□□□ 0.7
SMARCAL1-209ENST00000444508 DENND3A2RUS2 1198 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 ENPP3O14638 875 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 SLC26A4O43511 780 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 GJB5O95377 273 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 SRGAP2CP0DJJ0 459 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 SFPQP23246 707 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 MARCKSP29966 332 aaPredicted RBP19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 TFDP1Q14186 410 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 STK38Q15208 465 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 TMCO2Q7Z6W1 182 aaPredicted RBP19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 CABP7Q86V35 215 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 KCTD17Q8N5Z5 321 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 DEFB123Q8N688 67 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 RASSF8Q8NHQ8 419 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 CALML4Q96GE6 196 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 NKX2-4Q9H2Z4 354 aa19.4■□□□□ 0.7
SMARCAL1-209ENST00000444508 SZT2Q5T011 3432 aa19.39■□□□□ 0.7
SMARCAL1-209ENST00000444508 E9PMD0 336 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 EYA4O95677 639 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 NASPP49321 788 aaPredicted RBP19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 PKP1Q13835 747 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 SLC39A14Q15043 492 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 HYIQ5T013 277 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 MAEAQ7L5Y9 396 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 RAD9AQ99638 391 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 TSPYL2Q9H2G4 693 aaPredicted RBP19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 TMX1Q9H3N1 280 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 SLC28A3Q9HAS3 691 aa19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 YBX2Q9Y2T7 364 aaKnown RBP19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 SRPRBQ9Y5M8 271 aaKnown RBP19.39■□□□□ 0.69
SMARCAL1-209ENST00000444508 UPP2O95045 317 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 MYOGP15173 224 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 CYP11B2P19099 503 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 ARL2P36404 184 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 PHKA2P46019 1235 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 FOXD4L6Q3SYB3 417 aaPredicted RBP19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 FAM102BQ5T8I3 360 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 FOXD4L3Q6VB84 417 aaPredicted RBP19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 Q7L0L9 218 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 RNF149Q8NC42 400 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 LINC01599Q8WXQ3 324 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 TOP1MTQ969P6 601 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 PNMA5Q96PV4 448 aa19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 FBXO2Q9UK22 296 aaPredicted RBP19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 MORC2Q9Y6X9 1032 aaPredicted RBP19.38■□□□□ 0.69
SMARCAL1-209ENST00000444508 CSDE1O75534 798 aaKnown RBP19.37■□□□□ 0.69
SMARCAL1-209ENST00000444508 CA3P07451 260 aa19.37■□□□□ 0.69
SMARCAL1-209ENST00000444508 ZSCAN20P17040 1043 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms