RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, human

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00475-208	ENST00000444476	PTGS1	P23219	599 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	SP2	Q02086	613 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	HSDL1	Q3SXM5	330 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	MOXD1	Q6UVY6	613 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	CYFIP1	Q7L576	1253 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	KRT25	Q7Z3Z0	450 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	NECAB1	Q8N987	351 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	NAP1L4	Q99733	375 aa	Known RBP	12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	ALG1	Q9BT22	464 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	JPH1	Q9HDC5	661 aa	Predicted RBP	12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	TMEM39A	Q9NV64	488 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	ZNF215	Q9UL58	517 aa	Predicted RBP	12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476	KIF3A	Q9Y496	699 aa		12.52	□□□□□ -0.41
LINC00475-208	ENST00000444476		M0R2N6	131 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	GDF10	P55107	478 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	FAAP100	Q0VG06	881 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	NONO	Q15233	471 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	CHSY3	Q70JA7	882 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	CD163	Q86VB7	1156 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	SEPT1	Q8WYJ6	367 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	TNPO1	Q92973	898 aa	Known RBP	12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	PGBD1	Q96JS3	809 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	GPR20	Q99678	358 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	GDF15	Q99988	308 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	TCEAL9	Q9UHQ7	104 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	TBX21	Q9UL17	535 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	GRIN2D	O15399	1336 aa		12.51	□□□□□ -0.41
LINC00475-208	ENST00000444476	TRIOBP	Q9H2D6	2365 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	IGLV3-22	A0A075B6J6	115 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	CCDC194	A0A1B0GVG4	234 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	HAS3	O00219	553 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	LGALS2	P05162	132 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	FDPS	P14324	419 aa	Known RBP	12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	RAG1	P15918	1043 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	GCFC2	P16383	781 aa	Known RBP	12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	SYN1	P17600	705 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	PSMC6	P62333	389 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	NPY5R	Q15761	445 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	FAM47C	Q5HY64	1035 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	PLA2G4D	Q86XP0	818 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	CCDC83	Q8IWF9	413 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	C7orf31	Q8N865	590 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	KAT2B	Q92831	832 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	AIFM3	Q96NN9	605 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	AGO4	Q9HCK5	861 aa	Known RBP	12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	TBC1D22B	Q9NU19	505 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	SLC9A2	Q9UBY0	812 aa		12.5	□□□□□ -0.41
LINC00475-208	ENST00000444476	LTBP2	Q14767	1821 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	EMSY	Q7Z589	1322 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	FAM86B1	E9PN63	330 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476		H3BRB1	525 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	IPO5	O00410	1097 aa	Known RBP	12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	ATP9A	O75110	1047 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	TIMP1	P01033	207 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	FAM86B2	P0C5J1	330 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	GNAT1	P11488	350 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	ATP4A	P20648	1035 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	CYP3A7	P24462	503 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	KRT2	P35908	639 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	MAGEA10	P43363	369 aa	Predicted RBP	12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	SAFB	Q15424	915 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	KIAA0753	Q2KHM9	967 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	MAP7D1	Q3KQU3	841 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	FAM184A	Q8NB25	1140 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	RASGRP4	Q8TDF6	673 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	TBCK	Q8TEA7	893 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	C16orf70	Q9BSU1	422 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	PRO3102	Q9H379	93 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	SMARCAD1	Q9H4L7	1026 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	TUT1	Q9H6E5	874 aa	Known RBP	12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	GTF2IRD1	Q9UHL9	959 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	NOD1	Q9Y239	953 aa		12.49	□□□□□ -0.41
LINC00475-208	ENST00000444476	TRIM43B	A6NCK2	446 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	B4GALT4	O60513	344 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	STAU1	O95793	577 aa	Known RBP	12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	MMP1	P03956	469 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	ZNF286B	P0CG31	522 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	AR	P10275	920 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	TCF7	P36402	384 aa	Predicted RBP	12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	SLC26A2	P50443	739 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	SMTN	P53814	917 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	ST3GAL1	Q11201	340 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	BFSP2	Q13515	415 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476		Q4G0T1	1027 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	PRR16	Q569H4	304 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	NEK8	Q86SG6	692 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	TMEM199	Q8N511	208 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	CYP2W1	Q8TAV3	490 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	CAGE1	Q8TC20	777 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	RIT2	Q99578	217 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	ZNF577	Q9BSK1	485 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	UBE2O	Q9C0C9	1292 aa	Known RBP	12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	HIPK3	Q9H422	1215 aa		12.48	□□□□□ -0.41
LINC00475-208	ENST00000444476	AZI2	Q9H6S1	392 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms