RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 FBXW10Q5XX13 1052 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 INTS8Q75QN2 995 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 CYP2U1Q7Z449 544 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 KDF1Q8NAX2 398 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 SEPT1Q8WYJ6 367 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 AHCYL2Q96HN2 611 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 ZSCAN31Q96LW9 406 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 UIMC1Q96RL1 719 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 KLK14Q9P0G3 267 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TBC1D7Q9P0N9 293 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ZSWIM5Q9P217 1185 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 VPS28Q9UK41 221 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 AGO2Q9UKV8 859 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 PADI4Q9UM07 663 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TRIM35Q9UPQ4 493 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 POLR3KQ9Y2Y1 108 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 ANGPTL3Q9Y5C1 460 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 NPFFR2Q9Y5X5 522 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 CEP164Q9UPV0 1460 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TOP2BQ02880 1626 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TCRBV16S1A1N1A0A5B0 115 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 LRRC14BA6NHZ5 514 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 H3BML4 177 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 SOAT2O75908 522 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TRIM16O95361 564 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ZNF865P0CJ78 1059 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 PEX2P28328 305 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ACSL1P33121 698 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 KRT2P35908 639 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 COG7P83436 770 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 DDR1Q08345 913 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 KRT32Q14532 448 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ARHGEF6Q15052 776 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TAF5Q15542 800 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TRIP4Q15650 581 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 LPCAT2Q7L5N7 544 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 PRPF39Q86UA1 669 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 CEP97Q8IW35 865 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 RPAP2Q8IXW5 612 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 CCDC13Q8IYE1 715 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TOR1AIP2Q8NFQ8 470 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 UCMAQ8WVF2 138 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 BRI3BPQ8WY22 251 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 B3GALT2O43825 422 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 PAK3O75914 559 aaPredicted RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 CLTBP09497 229 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 POLR2FP61218 127 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 KIAA0753Q2KHM9 967 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 MAJINQ3KP22 176 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 C4orf48Q5BLP8 95 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 CREB3L3Q68CJ9 461 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 DCLRE1AQ6PJP8 1040 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 GK5Q6ZS86 529 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 GLRX5Q86SX6 157 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ANKRD35Q8N283 1001 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 C2orf69Q8N8R5 385 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 ZDHHC1Q8WTX9 485 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 SGCDQ92629 289 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 TSEN34Q9BSV6 310 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 SORBS1Q9BX66 1292 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 UNKQ9C0B0 810 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 NUP62CLQ9H1M0 184 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 GRPEL1Q9HAV7 217 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 DDX18Q9NVP1 670 aaKnown RBP4.37□□□□□ -1.71
UBR3-206ENST00000444475 DONSONQ9NYP3 566 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 SYNJ2O15056 1496 aa4.37□□□□□ -1.71
UBR3-206ENST00000444475 SART1O43290 800 aaKnown RBP4.36□□□□□ -1.71
UBR3-206ENST00000444475 CFHP08603 1231 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 IFNAR1P17181 557 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 GAP43P17677 238 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 GPR3P46089 330 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 RBP5P82980 135 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 TLE2Q04725 743 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 LASP1Q14847 261 aaKnown RBP4.36□□□□□ -1.71
UBR3-206ENST00000444475 ADIPOQQ15848 244 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 ATP2B3Q16720 1220 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 ANO4Q32M45 955 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 FAM209BQ5JX69 171 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 CCDC183Q5T5S1 534 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 MCTP1Q6DN14 999 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 IQSEC1Q6DN90 963 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 GPR139Q6DWJ6 353 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 OTUD7BQ6GQQ9 843 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 ABHD17CQ6PCB6 329 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 ZBTB33Q86T24 672 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 COL23A1Q86Y22 540 aaPredicted RBP4.36□□□□□ -1.71
UBR3-206ENST00000444475 Q8NFD4 153 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 SH3RF3Q8TEJ3 882 aaPredicted RBP4.36□□□□□ -1.71
UBR3-206ENST00000444475 HDAC7Q8WUI4 952 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 TRIM63Q969Q1 353 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 PPP1R13BQ96KQ4 1090 aa4.36□□□□□ -1.71
UBR3-206ENST00000444475 LENG8Q96PV6 779 aaPredicted RBP4.36□□□□□ -1.71
UBR3-206ENST00000444475 ATP6V0BQ99437 205 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms