RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 COL19A1Q14993 1142 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 CALCRLQ16602 461 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 PAN2Q504Q3 1202 aaKnown RBP15.72■□□□□ 0.11
TREX1-202ENST00000444177 NCAPH2Q6IBW4 605 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 SLC24A5Q71RS6 500 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 FAM228AQ86W67 206 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 SLFN12Q8IYM2 578 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 LINC01465Q8N7H1 131 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 HAS1Q92839 578 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 P2RX5Q93086 422 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 PABPC5Q96DU9 382 aaKnown RBP15.72■□□□□ 0.11
TREX1-202ENST00000444177 ADAMTS10Q9H324 1103 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 C1orf112Q9NSG2 853 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 C9IYK1 514 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 H3BQ06 376 aaPredicted RBP15.71■□□□□ 0.11
TREX1-202ENST00000444177 WNT7AO00755 349 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 NCK2O43639 380 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 NLRP11P59045 1033 aaKnown RBP15.71■□□□□ 0.11
TREX1-202ENST00000444177 FAM189BP81408 668 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 CAMK1Q14012 370 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 MTERF2Q49AM1 385 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 NAALADL2Q58DX5 795 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 PTCRAQ6ISU1 281 aaPredicted RBP15.71■□□□□ 0.11
TREX1-202ENST00000444177 EP400NLQ6ZTU2 488 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 LRRC71Q8N4P6 559 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 SPPL3Q8TCT6 385 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 MAP7D2Q96T17 732 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 FOXP1Q9H334 677 aaPredicted RBP15.71■□□□□ 0.11
TREX1-202ENST00000444177 CD320Q9NPF0 282 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
TREX1-202ENST00000444177 AKT3Q9Y243 479 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 RALGAPA2Q2PPJ7 1873 aa15.71■□□□□ 0.11
TREX1-202ENST00000444177 TMEM150BA6NC51 233 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 GRXCR2A6NFK2 248 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 ITGB1P05556 798 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 DNAJB1P25685 340 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 PSMC5P62195 406 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 HYAL1Q12794 435 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 DSC3Q14574 896 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 TARBP2Q15633 366 aaKnown RBP15.7■□□□□ 0.1
TREX1-202ENST00000444177 PUS10Q3MIT2 529 aaKnown RBP15.7■□□□□ 0.1
TREX1-202ENST00000444177 XKR3Q5GH77 459 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 FAM102BQ5T8I3 360 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 FAM178BQ8IXR5 827 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 ZNF710Q8N1W2 664 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 EPHX3Q9H6B9 360 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 CLDND1Q9NY35 253 aa15.7■□□□□ 0.1
TREX1-202ENST00000444177 TBKBP1A7MCY6 615 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 DKC1O60832 514 aaKnown RBP eCLIP15.69■□□□□ 0.1
TREX1-202ENST00000444177 CSPG5O95196 566 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 STBD1O95210 358 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 IL9P15248 144 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 EIF4BP23588 611 aaKnown RBP15.69■□□□□ 0.1
TREX1-202ENST00000444177 MCM7P33993 719 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 LTBRP36941 435 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
TREX1-202ENST00000444177 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 CTC1Q2NKJ3 1217 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
TREX1-202ENST00000444177 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 LXNQ9BS40 222 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 C1QTNF1Q9BXJ1 281 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 NIFKQ9BYG3 293 aaKnown RBP15.69■□□□□ 0.1
TREX1-202ENST00000444177 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 TMEM161AQ9NX61 479 aa15.69■□□□□ 0.1
TREX1-202ENST00000444177 DDX11L8A8MPP1 907 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
TREX1-202ENST00000444177 COL9A1P20849 921 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 GJB2P29033 226 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 TXKP42681 527 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 SPIRE1Q08AE8 756 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 EPHA7Q15375 998 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 POF1BQ8WVV4 589 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 KHSRPQ92945 711 aaKnown RBP eCLIP15.68■□□□□ 0.1
TREX1-202ENST00000444177 DYDC2Q96IM9 177 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 IGFLR1Q9H665 355 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 ELAC1Q9H777 363 aaKnown RBP15.68■□□□□ 0.1
TREX1-202ENST00000444177 TTC12Q9H892 705 aaPredicted RBP15.68■□□□□ 0.1
TREX1-202ENST00000444177 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
TREX1-202ENST00000444177 PCDHA12Q9UN75 941 aa15.68■□□□□ 0.1
TREX1-202ENST00000444177 FGFR1P11362 822 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 DARSP14868 501 aaKnown RBP15.67■□□□□ 0.1
TREX1-202ENST00000444177 ZSCAN20P17040 1043 aaPredicted RBP15.67■□□□□ 0.1
TREX1-202ENST00000444177 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
TREX1-202ENST00000444177 GPC3P51654 580 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 TTC38Q5R3I4 469 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 SPOUT1Q5T280 376 aaKnown RBP15.67■□□□□ 0.1
TREX1-202ENST00000444177 GJD3Q8N144 294 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 SCLT1Q96NL6 688 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 CEP89Q96ST8 783 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 TYW1Q9NV66 732 aaKnown RBP15.67■□□□□ 0.1
TREX1-202ENST00000444177 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 WRAP73Q9P2S5 460 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms