RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 VAT1LQ9HCJ6 419 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 TNKSO95271 1327 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 CCDC22O60826 627 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 CETN1Q12798 172 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 DCAF17Q5H9S7 520 aaPredicted RBP5.4□□□□□ -1.55
HERC1-201ENST00000443617 CCDC65Q8IXS2 484 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 VPS37BQ9H9H4 285 aa5.4□□□□□ -1.55
HERC1-201ENST00000443617 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 MYMKA6NI61 221 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZNF189O75820 626 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 CBX6O95503 412 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 AFPP02771 609 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 MAPK7Q13164 816 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TTYH3Q9C0H2 523 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 STARD3NLO95772 234 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 EARS2Q5JPH6 523 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 CYP4F22Q6NT55 531 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 DYMQ7RTS9 669 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TRIM42Q8IWZ5 723 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CRNKL1Q9BZJ0 848 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 Q9H521 79 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 RPL26L1Q9UNX3 145 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERC1-201ENST00000443617 A0A0G2JND7 137 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PODXLO00592 558 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 LGR5O75473 907 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 UNC5CO95185 931 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ALADP13716 330 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 KLRC3Q07444 240 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PLS1Q14651 629 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 NBPF15Q8N660 670 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 RMDN2Q96LZ7 410 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 COMMD3-BMI1R4GMX3 469 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ENTPD5O75356 428 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 GJB6O95452 261 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PCCAP05165 728 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 PLCG2P16885 1265 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PSMD7P51665 324 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 NPEPPSP55786 919 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 KSR1Q8IVT5 923 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZNF184Q99676 751 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 TRABDQ9H4I3 376 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 USP6P35125 1406 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CAPN9O14815 690 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 KRT15P19012 456 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 MAN1A1P33908 653 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SERPINB12Q96P63 405 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PCMTD2Q9NV79 361 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PTPN22Q9Y2R2 807 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 KLRC4O43908 158 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CYLC2Q14093 348 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 CARD9Q9H257 536 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SETD1BQ9UPS6 1966 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 COQ9O75208 318 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ACTN1P12814 892 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ASTE1Q2TB18 679 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 FAM13CQ8NE31 585 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SNRNP27Q8WVK2 155 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 DNAAF2Q9NVR5 837 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 AFF2P51816 1311 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 GPR75-ASB3A0A0A6YYF3 556 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TJP3O95049 919 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 HNRNPCP07910 306 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERC1-201ENST00000443617 CCNB1P14635 433 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TXKP42681 527 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 INHBEP58166 350 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 RASGRF1Q13972 1273 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TNIP1Q15025 636 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZNF571Q7Z3V5 609 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 TTLL11Q8NHH1 800 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SLC35G2Q8TBE7 412 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 BIN2Q9UBW5 565 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 HAO1Q9UJM8 370 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ASB3Q9Y575 518 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TSPY2A6NKD2 308 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZCCHC18P0CG32 403 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 GNAZP19086 355 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 DSG1Q02413 1049 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 LONRF1Q17RB8 773 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 DUPD1Q68J44 220 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 IFNL2Q8IZJ0 200 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 IKBKGQ9Y6K9 419 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SLC4A7Q9Y6M7 1214 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZFYVE16Q7Z3T8 1539 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PDLIM1O00151 329 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CALUO43852 315 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 SPAG7O75391 227 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ABCB4P21439 1286 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 C1orf146Q5VVC0 180 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 INPP5DQ92835 1189 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 RNF25Q96BH1 459 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 EPB41L4AQ9HCS5 686 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 DCTN4Q9UJW0 460 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 FAF1Q9UNN5 650 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms