RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 BASP1P80723 227 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 SLMAPQ14BN4 828 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 PASD1Q8IV76 773 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 CCT6BQ92526 530 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 INTS2Q9H0H0 1204 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 PDXKO00764 312 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 HIP1RO75146 1068 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 SFNP31947 248 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 RASSF2P50749 326 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 MCF2LO15068 1137 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 PRR12Q9ULL5 1215 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 MED7O43513 233 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 SURF1Q15526 300 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 ERICH1Q86X53 443 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 FBXO40Q9UH90 709 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 KIF20BQ96Q89 1820 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 GIPC1O14908 333 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 TOB1P50616 345 aaPredicted RBP24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 MAPK6Q16659 721 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 FAM49AQ9H0Q0 323 aaPredicted RBP24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 EMSYQ7Z589 1322 aa24.12■■□□□ 1.45
CTDSPL-206ENST00000443503 GYPCP04921 128 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 TMEM270Q6UE05 265 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 ADGRA1Q86SQ6 560 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 C11orf70Q9BRQ4 267 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 FTLP02792 175 aaPredicted RBP24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 NTRK3Q16288 839 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 CCDC197Q8NCU1 140 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 RRP15Q9Y3B9 282 aaKnown RBP24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 ACSL3O95573 720 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 FRMD5Q7Z6J6 570 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 TACO1Q9BSH4 297 aaKnown RBP24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 PPP1R12CQ9BZL4 782 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 ZNF667Q5HYK9 610 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 RASGRP2Q7LDG7 609 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 HEXIM2Q96MH2 286 aaKnown RBP24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 REEP2Q9BRK0 252 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 FUCA2Q9BTY2 467 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 HEMGNQ9BXL5 484 aa24.11■■□□□ 1.45
CTDSPL-206ENST00000443503 SLIT1O75093 1534 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 SUN1O94901 812 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 ZRANB2O95218 330 aaKnown RBP eCLIP24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 CLTAP09496 248 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 IL9RQ01113 521 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 TMED2Q15363 201 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 ZNF668Q96K58 619 aaPredicted RBP24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 KIAA1586Q9HCI6 787 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 MAD2L2Q9UI95 211 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 SNX25Q9H3E2 840 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 GABPAQ06546 454 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 KRT39Q6A163 491 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 TRIM10Q9UDY6 481 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 PLAAQ9Y263 795 aa24.1■■□□□ 1.45
CTDSPL-206ENST00000443503 ITIH6Q6UXX5 1313 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 A0A1B0GUA9 196 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SEC23AQ15436 765 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SLC10A4Q96EP9 437 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 AP5M1Q9H0R1 490 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SYNGAP1Q96PV0 1343 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 PPP1R3GB7ZBB8 358 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 ENTPD3O75355 529 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 HMGCS2P54868 508 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 KCTD6Q8NC69 237 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SPATA4Q8NEY3 305 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 HPSEQ9Y251 543 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SAT1P21673 171 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SLC10A5Q5PT55 438 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 CCNYQ8ND76 341 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 NGRNQ9NPE2 291 aaKnown RBP24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 PCDHA10Q9Y5I2 948 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 SCINQ9Y6U3 715 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 VSNL1P62760 191 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 BBS9Q3SYG4 887 aa24.09■■□□□ 1.45
CTDSPL-206ENST00000443503 MST1RQ04912 1400 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 PDCLQ13371 301 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 CYFIP1Q7L576 1253 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 RPAP3Q9H6T3 665 aaPredicted RBP24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 MYO1EQ12965 1108 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 TMEM35BQ8NCS4 154 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 TUFT1Q9NNX1 390 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 ZNRF3Q9ULT6 936 aa24.08■■□□□ 1.45
CTDSPL-206ENST00000443503 GGCXP38435 758 aa24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 EIF3BP55884 814 aaKnown RBP24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 PDE1BQ01064 536 aa24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 DARS2Q6PI48 645 aaKnown RBP24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 RBM43Q6ZSC3 357 aaKnown RBP24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 PSPC1Q8WXF1 523 aaKnown RBP24.08■■□□□ 1.44
CTDSPL-206ENST00000443503 AFAP1L2Q8N4X5 818 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 PRPSAP2O60256 369 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 PPP4R1Q8TF05 950 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 ACAD9Q9H845 621 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 EXOC1LA0A1B0GW35 172 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 ESYT2A0FGR8 921 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF302Q9NR11 478 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 PODXLO00592 558 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 ACTN1P12814 892 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 TCP11Q8WWU5 503 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 CDKL2Q92772 493 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms