RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 DSC3Q14574 896 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 NLRP7Q8WX94 980 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 CEP170P1Q96L14 293 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 HSD17B14Q9BPX1 270 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 EIF2AK1Q9BQI3 630 aaKnown RBP24.77■■□□□ 1.56
HDLBP-220ENST00000442730 LMCD1Q9NZU5 365 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 PPME1Q9Y570 386 aa24.77■■□□□ 1.56
HDLBP-220ENST00000442730 SLITRK3O94933 977 aa24.76■■□□□ 1.55
HDLBP-220ENST00000442730 GNL2Q13823 731 aaKnown RBP24.76■■□□□ 1.55
HDLBP-220ENST00000442730 BTG3Q14201 252 aaPredicted RBP24.76■■□□□ 1.55
HDLBP-220ENST00000442730 SLC24A5Q71RS6 500 aa24.76■■□□□ 1.55
HDLBP-220ENST00000442730 SLC7A3Q8WY07 619 aa24.76■■□□□ 1.55
HDLBP-220ENST00000442730 JPH2Q9BR39 696 aaPredicted RBP24.76■■□□□ 1.55
HDLBP-220ENST00000442730 DHX33Q9H6R0 707 aaKnown RBP24.76■■□□□ 1.55
HDLBP-220ENST00000442730 SUCLA2Q9P2R7 463 aaPredicted RBP24.76■■□□□ 1.55
HDLBP-220ENST00000442730 XIRP2A4UGR9 3374 aa24.76■■□□□ 1.55
HDLBP-220ENST00000442730 NLRC5Q86WI3 1866 aa24.76■■□□□ 1.55
HDLBP-220ENST00000442730 ARID2Q68CP9 1835 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 POTEMA6NI47 508 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 C9IYK1 514 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 LYPLA2O95372 231 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 U2AF2P26368 475 aaKnown RBP eCLIP24.75■■□□□ 1.557e-6■■□□□ 14.4
HDLBP-220ENST00000442730 CTNNB1P35222 781 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 RFC5P40937 340 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 MCM2P49736 904 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 CDC42EP1Q00587 391 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 TPH2Q8IWU9 490 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 CMTR2Q8IYT2 770 aaKnown RBP24.75■■□□□ 1.55
HDLBP-220ENST00000442730 NEK9Q8TD19 979 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 CLP1Q92989 425 aaKnown RBP24.75■■□□□ 1.55
HDLBP-220ENST00000442730 BACH2Q9BYV9 841 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 THEGQ9P2T0 379 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 LRFN2Q9ULH4 789 aa24.75■■□□□ 1.55
HDLBP-220ENST00000442730 H3BNC9 293 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 ZBTB39O15060 712 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 IBSPP21815 317 aaPredicted RBP24.74■■□□□ 1.55
HDLBP-220ENST00000442730 TRAPPC10P48553 1259 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 GATMP50440 423 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 POLGP54098 1239 aaPredicted RBP24.74■■□□□ 1.55
HDLBP-220ENST00000442730 ZNF174Q15697 407 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 TTC38Q5R3I4 469 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 ZNF410Q86VK4 478 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 RHPN2Q8IUC4 686 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 RWDD3Q9Y3V2 267 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 KIF3AQ9Y496 699 aa24.74■■□□□ 1.55
HDLBP-220ENST00000442730 MRPL42Q9Y6G3 142 aaKnown RBP24.74■■□□□ 1.55
HDLBP-220ENST00000442730 A0A087WZ62 844 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 C5orf67F2Z3F1 127 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 OR52Z1P0C646 297 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 FGFR4P22455 802 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 EMC2Q15006 297 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 OTUD6AQ7L8S5 288 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 KSR1Q8IVT5 923 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 FDXACB1Q9BRP7 624 aaPredicted RBP24.73■■□□□ 1.55
HDLBP-220ENST00000442730 GCOM2Q9BZD3 368 aaPredicted RBP24.73■■□□□ 1.55
HDLBP-220ENST00000442730 BMP2KQ9NSY1 1161 aaPredicted RBP24.73■■□□□ 1.55
HDLBP-220ENST00000442730 PCDHB7Q9Y5E2 793 aa24.73■■□□□ 1.55
HDLBP-220ENST00000442730 CSDE1O75534 798 aaKnown RBP24.72■■□□□ 1.55
HDLBP-220ENST00000442730 BMPR1AP36894 532 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 FAM189BP81408 668 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 GPM6BQ13491 265 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 NBR1Q14596 966 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 PAN2Q504Q3 1202 aaKnown RBP24.72■■□□□ 1.55
HDLBP-220ENST00000442730 XKR9Q5GH70 373 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 EXOC8Q8IYI6 725 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 TMEM143Q96AN5 459 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 NLRP4Q96MN2 994 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 TMEM161AQ9NX61 479 aa24.72■■□□□ 1.55
HDLBP-220ENST00000442730 NOL7Q9UMY1 257 aaKnown RBP24.72■■□□□ 1.55
HDLBP-220ENST00000442730 TTC28Q96AY4 2481 aa24.71■■□□□ 1.55
HDLBP-220ENST00000442730 SKIV2LQ15477 1246 aaKnown RBP24.71■■□□□ 1.55
HDLBP-220ENST00000442730 MRPL38Q96DV4 380 aaKnown RBP24.71■■□□□ 1.55
HDLBP-220ENST00000442730 RNF216Q9NWF9 866 aaPredicted RBP24.71■■□□□ 1.55
HDLBP-220ENST00000442730 COL4A3BPQ9Y5P4 624 aa24.71■■□□□ 1.55
HDLBP-220ENST00000442730 KIAA1671Q9BY89 1806 aa24.7■■□□□ 1.55
HDLBP-220ENST00000442730 DLL1O00548 723 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 GAS2O43903 313 aaKnown RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 RB1P06400 928 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 SPATA31C1P0DKV0 1188 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 SFPQP23246 707 aaKnown RBP eCLIP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 GJB2P29033 226 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 TOB1P50616 345 aaPredicted RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 ATXN2LQ8WWM7 1075 aaKnown RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 PRPF31Q8WWY3 499 aaKnown RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 PSPC1Q8WXF1 523 aaKnown RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 C11orf84Q9BUA3 381 aaPredicted RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 COL25A1Q9BXS0 654 aaPredicted RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 ELAC1Q9H777 363 aaKnown RBP24.7■■□□□ 1.54
HDLBP-220ENST00000442730 IFT122Q9HBG6 1241 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 ANKEF1Q9NU02 776 aa24.7■■□□□ 1.54
HDLBP-220ENST00000442730 FGFR1P11362 822 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 ZSCAN20P17040 1043 aaPredicted RBP24.69■■□□□ 1.54
HDLBP-220ENST00000442730 TECP42680 631 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 PTPROQ16827 1216 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 FAM102BQ5T8I3 360 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 C4orf32Q8N8J7 132 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 ATP6V0A4Q9HBG4 840 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 XPNPEP1Q9NQW7 623 aa24.69■■□□□ 1.54
HDLBP-220ENST00000442730 LAMTOR4Q0VGL1 99 aa24.68■■□□□ 1.54
HDLBP-220ENST00000442730 TJAP1Q5JTD0 557 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms