RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 AGO3Q9H9G7 860 aaKnown RBP17.84■□□□□ 0.45
USP39-205ENST00000442708 ATP6V0A4Q9HBG4 840 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 GDPD2Q9HCC8 539 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 PTPRSQ13332 1948 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 RPLP2P05387 115 aaKnown RBP17.83■□□□□ 0.44
USP39-205ENST00000442708 CYP11B2P19099 503 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 ME1P48163 572 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 GPC3P51654 580 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 ASAP3Q8TDY4 903 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 CDK5RAP3Q96JB5 506 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.44
USP39-205ENST00000442708 MAP7D2Q96T17 732 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 OSMRQ99650 979 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
USP39-205ENST00000442708 RUSC1Q9BVN2 902 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 PANK2Q9BZ23 570 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 GINS2Q9Y248 185 aa17.83■□□□□ 0.44
USP39-205ENST00000442708 MICAL3Q7RTP6 2002 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 M0QZ92 97 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 PARNO95453 639 aaKnown RBP17.82■□□□□ 0.44
USP39-205ENST00000442708 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 ARL2P36404 184 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 DNM2P50570 870 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 CRYBB1P53674 252 aaPredicted RBP17.82■□□□□ 0.44
USP39-205ENST00000442708 SLC12A3P55017 1021 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 LAMTOR4Q0VGL1 99 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 MCM6Q14566 821 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 PLEKHG4Q58EX7 1191 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 RINT1Q6NUQ1 792 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 C1orf186Q6ZWK4 172 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 EXOC8Q8IYI6 725 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
USP39-205ENST00000442708 DBF4BQ8NFT6 615 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
USP39-205ENST00000442708 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
USP39-205ENST00000442708 NOC2LQ9Y3T9 749 aaKnown RBP17.82■□□□□ 0.44
USP39-205ENST00000442708 A0A087WZ62 844 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 GAS2O43903 313 aaKnown RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 CSDE1O75534 798 aaKnown RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 FGBP02675 491 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 CD52P31358 61 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 ARSHQ5FYA8 562 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 TSHZ1Q6ZSZ6 1077 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 SYT2Q8N9I0 419 aaPredicted RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 PSPC1Q8WXF1 523 aaKnown RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 BSNDQ8WZ55 320 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 RAD54LQ92698 747 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 POLR3FQ9H1D9 316 aaPredicted RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 COL4A3BPQ9Y5P4 624 aa17.81■□□□□ 0.44
USP39-205ENST00000442708 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
USP39-205ENST00000442708 NPHP3-ACAD11A0A0J9YXS1 232 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP39-205ENST00000442708 PFKMP08237 780 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 FGFR4P22455 802 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 GLRA2P23416 452 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 MAPK7Q13164 816 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 CAPSQ13938 189 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 FAM102BQ5T8I3 360 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 RESP18Q5W5W9 173 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 CNKSR3Q6P9H4 555 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
USP39-205ENST00000442708 DAW1Q8N136 415 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 KCTD17Q8N5Z5 321 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 PDILTQ8N807 584 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 RASSF8Q8NHQ8 419 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 TCP11Q8WWU5 503 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 NLRP7Q8WX94 980 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 HERVK_113Q902F9 699 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 IFIH1Q9BYX4 1025 aaKnown RBP17.8■□□□□ 0.44
USP39-205ENST00000442708 SCAND2PQ9GZW5 306 aaPredicted RBP17.8■□□□□ 0.44
USP39-205ENST00000442708 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 ERVK-5Q9HDB9 667 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 MYH11P35749 1972 aa17.8■□□□□ 0.44
USP39-205ENST00000442708 SRGAP2CP0DJJ0 459 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 DARSP14868 501 aaKnown RBP17.79■□□□□ 0.44
USP39-205ENST00000442708 DHX8Q14562 1220 aaKnown RBP17.79■□□□□ 0.44
USP39-205ENST00000442708 E2F4Q16254 413 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 RRAGBQ5VZM2 374 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 FAM228AQ86W67 206 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 TDHQ8IZJ6 230 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 MCPH1Q8NEM0 835 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 TMX1Q9H3N1 280 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 MINDY3Q9H8M7 445 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 PADI3Q9ULW8 664 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 TRIOBPQ9H2D6 2365 aa17.79■□□□□ 0.44
USP39-205ENST00000442708 HIP1RO75146 1068 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 EIF4BP23588 611 aaKnown RBP17.78■□□□□ 0.44
USP39-205ENST00000442708 TXLNAP40222 546 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms