RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ODR4Q5SWX8 454 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 PLPP4Q5VZY2 271 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 SYCE2Q6PIF2 218 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 TMEM184AQ6ZMB5 413 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 BMP8AQ7Z5Y6 402 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
TOP3B-209ENST00000442653 BRF1Q92994 677 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 PHKBQ93100 1093 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 GJA10Q969M2 543 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 CDCA3Q99618 268 aaPredicted RBP9.44□□□□□ -0.9
TOP3B-209ENST00000442653 TCF25Q9BQ70 676 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 APOL5Q9BWW9 433 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 TMEM117Q9H0C3 514 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 S1PR5Q9H228 398 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 ELAC1Q9H777 363 aaKnown RBP9.44□□□□□ -0.9
TOP3B-209ENST00000442653 C6orf50Q9HD87 102 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 NID2Q14112 1375 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 WDR81Q562E7 1941 aa9.44□□□□□ -0.9
TOP3B-209ENST00000442653 KMT2EQ8IZD2 1858 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 MAGEB2O15479 319 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 OATP04181 439 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
TOP3B-209ENST00000442653 FGFR4P22455 802 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 SP100P23497 879 aaPredicted RBP9.43□□□□□ -0.9
TOP3B-209ENST00000442653 EIF4BP23588 611 aaKnown RBP9.43□□□□□ -0.9
TOP3B-209ENST00000442653 FGD1P98174 961 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 PRKCEQ02156 737 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 DRP2Q13474 957 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 NTRK3Q16288 839 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 PDE12Q6L8Q7 609 aaKnown RBP9.43□□□□□ -0.9
TOP3B-209ENST00000442653 EFCAB12Q6NXP0 572 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 ANKRD54Q6NXT1 300 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 LLGL2Q6P1M3 1020 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 KCNT2Q6UVM3 1135 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 Q6ZUG5 572 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 ECHDC2Q86YB7 292 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 LRRC43Q8N309 656 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 RNF169Q8NCN4 708 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 KCNB2Q92953 911 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 ASIC4Q96FT7 647 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 FAM167AQ96KS9 214 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 JAKMIP1Q96N16 626 aaKnown RBP9.43□□□□□ -0.9
TOP3B-209ENST00000442653 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 ENTPD7Q9NQZ7 604 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 DISC1Q9NRI5 854 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 CEP131Q9UPN4 1083 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 AKT3Q9Y243 479 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 SAMM50Q9Y512 469 aa9.43□□□□□ -0.9
TOP3B-209ENST00000442653 TMEM150BA6NC51 233 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 MSH4O15457 936 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 HOXA2O43364 376 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 PRPF3O43395 683 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 CHMP2AO43633 222 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 CDC45O75419 566 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 CSDE1O75534 798 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 DARSP14868 501 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 GNA11P29992 359 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 TECP42680 631 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 GPC3P51654 580 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 TCF15Q12870 199 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 ABI1Q8IZP0 508 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SLC39A11Q8N1S5 342 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 CCDC12Q8WUD4 166 aaPredicted RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SLC5A5Q92911 643 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 ZNF558Q96NG5 402 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 NGRNQ9NPE2 291 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SPG21Q9NZD8 308 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 VPS54Q9P1Q0 977 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 TCEAL9Q9UHQ7 104 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 PUF60Q9UHX1 559 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 SNX14Q9Y5W7 946 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 HCFC2Q9Y5Z7 792 aa9.42□□□□□ -0.9
TOP3B-209ENST00000442653 RIF1Q5UIP0 2472 aaKnown RBP9.42□□□□□ -0.9
TOP3B-209ENST00000442653 A0A0U1RQF3 1178 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 FSD2A1L4K1 749 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 GAS7O60861 476 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
TOP3B-209ENST00000442653 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 TMOD1P28289 359 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 HSPA4P34932 840 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 PPM1AP35813 382 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 TARBP2Q15633 366 aaKnown RBP9.41□□□□□ -0.9
TOP3B-209ENST00000442653 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 TMC7Q7Z402 723 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 TMEM173Q86WV6 379 aaPredicted RBP9.41□□□□□ -0.9
TOP3B-209ENST00000442653 SUGP1Q8IWZ8 645 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms