RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 ASAP2O43150 1006 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 SKIP12755 728 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
NELFE-205ENST00000441998 RFC5P40937 340 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
NELFE-205ENST00000441998 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
NELFE-205ENST00000441998 ANO5Q75V66 913 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 NEK9Q8TD19 979 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 GJA10Q969M2 543 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
NELFE-205ENST00000441998 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
NELFE-205ENST00000441998 CYP26B1Q9NR63 512 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
NELFE-205ENST00000441998 PCDHA12Q9UN75 941 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 EML1O00423 815 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 MGEA5O60502 916 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 SFPQP23246 707 aaKnown RBP eCLIP12.49□□□□□ -0.41
NELFE-205ENST00000441998 RBM25P49756 843 aaKnown RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 TFF2Q03403 129 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 POU5F1BQ06416 359 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 NR5A1Q13285 461 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 TRMT1LQ7Z2T5 733 aaKnown RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 DIS3L2Q8IYB7 885 aaKnown RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 NLRP7Q8WX94 980 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 HSD17B14Q9BPX1 270 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 TMEM117Q9H0C3 514 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 GJB4Q9NTQ9 266 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 SUCLA2Q9P2R7 463 aaPredicted RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 PCDHB12Q9Y5F1 795 aa12.49□□□□□ -0.41
NELFE-205ENST00000441998 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
NELFE-205ENST00000441998 GBF1Q92538 1859 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 LARGE1O95461 756 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 YWHABP31946 246 aaKnown RBP12.48□□□□□ -0.41
NELFE-205ENST00000441998 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
NELFE-205ENST00000441998 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 SPPL3Q8TCT6 385 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 TCP11Q8WWU5 503 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 KIF2CQ99661 725 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 LXNQ9BS40 222 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 FOXP1Q9H334 677 aaPredicted RBP12.48□□□□□ -0.41
NELFE-205ENST00000441998 ANKEF1Q9NU02 776 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
NELFE-205ENST00000441998 GRM6O15303 877 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 NEMFO60524 1076 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 JAK2O60674 1132 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 ZNF623O75123 536 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 SLITRK3O94933 977 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 LAG3P18627 525 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 RAB27AP51159 221 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 CALCRLQ16602 461 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
NELFE-205ENST00000441998 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
NELFE-205ENST00000441998 C8orf76Q96K31 380 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 CEP170P1Q96L14 293 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 SCLT1Q96NL6 688 aa12.47□□□□□ -0.41
NELFE-205ENST00000441998 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
NELFE-205ENST00000441998 TBKBP1A7MCY6 615 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 DGAT1O75907 488 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 ITGB1P05556 798 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 MUTP22033 750 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 PPM1AP35813 382 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 KCNQ1P51787 676 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 POLGP54098 1239 aaPredicted RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 CAMK1Q14012 370 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 MXD4Q14582 209 aaPredicted RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 RABEP1Q15276 862 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 RHPN2Q8IUC4 686 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 ABI1Q8IZP0 508 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 KLHL23Q8NBE8 558 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 CDCA3Q99618 268 aaPredicted RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 PRKAG3Q9UGI9 489 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 PUF60Q9UHX1 559 aaKnown RBP12.46□□□□□ -0.41
NELFE-205ENST00000441998 KIF3AQ9Y496 699 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
NELFE-205ENST00000441998 PTPRSQ13332 1948 aa12.46□□□□□ -0.42
NELFE-205ENST00000441998 XIRP2A4UGR9 3374 aa12.46□□□□□ -0.42
NELFE-205ENST00000441998 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms