RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ATP4AP20648 1035 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 CA8P35219 290 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
SYN3-204ENST00000441821 POLGP54098 1239 aaPredicted RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 BCAR1P56945 870 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 NUCB1Q02818 461 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 TMC5Q6UXY8 1006 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 GPR149Q86SP6 731 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 ZNF598Q86UK7 904 aaKnown RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 CABP7Q86V35 215 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 CCDC60Q8IWA6 550 aaPredicted RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 MB21D2Q8IYB1 491 aaPredicted RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 KIAA2013Q8IYS2 634 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 TMEM169Q96HH4 297 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 MRPL9Q9BYD2 267 aaKnown RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 ZNF302Q9NR11 478 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
SYN3-204ENST00000441821 KMT2BQ9UMN6 2715 aaPredicted RBP11.37□□□□□ -0.59
SYN3-204ENST00000441821 CARNS1A5YM72 827 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 NT5C1B-RDH14C9J2C7 533 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 EIF4BP23588 611 aaKnown RBP11.36□□□□□ -0.59
SYN3-204ENST00000441821 NLRP11P59045 1033 aaKnown RBP11.36□□□□□ -0.59
SYN3-204ENST00000441821 PTH1RQ03431 593 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 SWSAP1Q6NVH7 229 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 MIS18BP1Q6P0N0 1132 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 CCDC149Q6ZUS6 474 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 NIPA1Q7RTP0 329 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 DDX53Q86TM3 631 aaKnown RBP11.36□□□□□ -0.59
SYN3-204ENST00000441821 TMTC2Q8N394 836 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 METTL13Q8N6R0 699 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 HELQQ8TDG4 1101 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
SYN3-204ENST00000441821 RSPH1Q8WYR4 309 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 SFXN1Q9H9B4 322 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 IGSF9Q9P2J2 1179 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 WNT16Q9UBV4 365 aa11.36□□□□□ -0.59
SYN3-204ENST00000441821 EVPLQ92817 2033 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 hCG_1642624A0A1W2PR95 340 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
SYN3-204ENST00000441821 MAGEB2O15479 319 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 FOSP01100 380 aaPredicted RBP11.35□□□□□ -0.59
SYN3-204ENST00000441821 CALM1P0DP23 149 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 CALM2P0DP24 149 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 CALM3P0DP25 149 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 ZC3H14Q6PJT7 736 aaKnown RBP11.35□□□□□ -0.59
SYN3-204ENST00000441821 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 CKAP2LQ8IYA6 745 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 ADAMTS10Q9H324 1103 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 RWDD1Q9H446 243 aaPredicted RBP11.35□□□□□ -0.59
SYN3-204ENST00000441821 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
SYN3-204ENST00000441821 R4GN57 208 aa11.35□□□□□ -0.59
SYN3-204ENST00000441821 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 STK25O00506 426 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
SYN3-204ENST00000441821 TMOD1P28289 359 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 CLCN3P51790 818 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 AAMPQ13685 434 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 EFCAB12Q6NXP0 572 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 CASC1Q6TDU7 716 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 C15orf39Q6ZRI6 1047 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
SYN3-204ENST00000441821 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 LINC01465Q8N7H1 131 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 RUFY2Q8WXA3 655 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 RUBCNQ92622 972 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 RIC8AQ9NPQ8 531 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 DACT1Q9NYF0 836 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 AKT3Q9Y243 479 aa11.34□□□□□ -0.59
SYN3-204ENST00000441821 EP300Q09472 2414 aaPredicted RBP11.33□□□□□ -0.6
SYN3-204ENST00000441821 CCDC69A6NI79 296 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 NARSO43776 548 aaKnown RBP11.33□□□□□ -0.6
SYN3-204ENST00000441821 ZC3H11AO75152 810 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYN3-204ENST00000441821 KRT37O76014 449 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 GALTP07902 379 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 CFHP08603 1231 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 DARSP14868 501 aaKnown RBP11.33□□□□□ -0.6
SYN3-204ENST00000441821 RFX1P22670 979 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 ZNF76P36508 570 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 SREBF1P36956 1147 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 LIFRP42702 1097 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 CLCN4P51793 760 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 NONOQ15233 471 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms