RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 ZNF669Q96BR6 464 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-208ENST00000441679 UBL7Q96S82 380 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-208ENST00000441679 LZTS2Q9BRK4 669 aa8.69□□□□□ -1.02
EPHA4-208ENST00000441679 SAP30BPQ9UHR5 308 aaKnown RBP8.69□□□□□ -1.02
EPHA4-208ENST00000441679 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
EPHA4-208ENST00000441679 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-208ENST00000441679 ROBO3Q96MS0 1386 aa8.69□□□□□ -1.02
EPHA4-208ENST00000441679 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 SCN4AP35499 1836 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 PRC1O43663 620 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 CDKL5O76039 1030 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 TTLL1O95922 423 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 NFICP08651 508 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 NAT2P11245 290 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 HAND2P61296 217 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 NFIAQ12857 509 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 SGO2Q562F6 1265 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 TMEM67Q5HYA8 995 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
EPHA4-208ENST00000441679 MRM1Q6IN84 353 aaKnown RBP8.68□□□□□ -1.02
EPHA4-208ENST00000441679 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 EZH1Q92800 747 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-208ENST00000441679 MYRFLQ96LU7 910 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 EPN3Q9H201 632 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 SEMA6CQ9H3T2 930 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 CWC22Q9HCG8 908 aaKnown RBP8.68□□□□□ -1.02
EPHA4-208ENST00000441679 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-208ENST00000441679 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 NYAP2Q9P242 653 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 PNMA2Q9UL42 364 aa8.68□□□□□ -1.02
EPHA4-208ENST00000441679 FAM181BA6NEQ2 426 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 DDTLA6NHG4 134 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 B4E1Z4 1266 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 C19orf81C9J6K1 198 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 MPHOSPH10O00566 681 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 TOMM70O94826 608 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 CHGBP05060 677 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 BMP3P12645 472 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 HSD3B2P26439 372 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 USP14P54578 494 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 EVCP57679 992 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 SGMS1Q86VZ5 419 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 ANKRD13AQ8IZ07 590 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 IGDCC4Q8TDY8 1250 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 KLHL6Q8WZ60 621 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 RNPC3Q96LT9 517 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 MIPEPQ99797 713 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 TMEM39BQ9GZU3 492 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 IL25Q9H293 177 aa8.67□□□□□ -1.02
EPHA4-208ENST00000441679 DDX4Q9NQI0 724 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
EPHA4-208ENST00000441679 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 ENPP3O14638 875 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 CPLX1O14810 134 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 FOXP2O15409 715 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 SUSD5O60279 629 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 XBP1P17861 261 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 ZNF143P52747 638 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 CACNB3P54284 484 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 AKAP17AQ02040 695 aaKnown RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 SSRP1Q08945 709 aaKnown RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 FSTL1Q12841 308 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 Q6ZUG5 572 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 MB21D2Q8IYB1 491 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 CTCFLQ8NI51 663 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 WASF1Q92558 559 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-208ENST00000441679 MTMR4Q9NYA4 1195 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 ZNF112Q9UJU3 913 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
EPHA4-208ENST00000441679 COL4A5P29400 1685 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 CNTNAP1P78357 1384 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 FAM95CA0A1B0GW59 222 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 ZBTB43O43298 467 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 NCLP19338 710 aaKnown RBP8.65□□□□□ -1.02
EPHA4-208ENST00000441679 PDCP20941 246 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 ETV3P41162 512 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 INHBEP58166 350 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 RNF4P78317 190 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 HMGN5P82970 282 aaKnown RBP8.65□□□□□ -1.02
EPHA4-208ENST00000441679 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
EPHA4-208ENST00000441679 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
EPHA4-208ENST00000441679 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
EPHA4-208ENST00000441679 MIGA2Q7L4E1 593 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 TEX2Q8IWB9 1127 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 CCDC144CPQ8IYA2 1237 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 LILRB2Q8N423 598 aa8.65□□□□□ -1.02
EPHA4-208ENST00000441679 CHURC1Q8WUH1 139 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms