RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SEC63Q9UGP8 760 aaKnown RBP21.97■■□□□ 1.11
SHOX2-203ENST00000441443 TRIM33Q9UPN9 1127 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 EIF6P56537 245 aaKnown RBP21.97■■□□□ 1.11
SHOX2-203ENST00000441443 MFSD14BQ5SR56 506 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 KLHL29Q96CT2 875 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 RAB34Q9BZG1 259 aa21.97■■□□□ 1.11
SHOX2-203ENST00000441443 DDX3XO00571 662 aaKnown RBP eCLIP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 SNX3O60493 162 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 FGFR4P22455 802 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 NR2F2P24468 414 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 TMEM119Q4V9L6 283 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 DCAF17Q5H9S7 520 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 DPY19L2P1Q6NXN4 242 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 PNMA3Q9UL41 463 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 COL5A3P25940 1745 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 KIF3CO14782 793 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 ABCB4P21439 1286 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 PON1P27169 355 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 GALCP54803 685 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 PTENP60484 403 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 SARNPP82979 210 aaKnown RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 EXOC3L4Q17RC7 722 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 COA7Q96BR5 231 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 KCTD10Q9H3F6 313 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 CD209Q9NNX6 404 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 MLXIPLQ9NP71 852 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 EMILIN3Q9NT22 766 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 FGFR1OP2Q9NVK5 253 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 CALRP27797 417 aaKnown RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 MARSP56192 900 aaKnown RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 CDCA2Q69YH5 1023 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 AADACL2Q6P093 401 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 SYCE1Q8N0S2 351 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 KCNV2Q8TDN2 545 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 DYDC1Q8WWB3 177 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 LRRC27Q9C0I9 530 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 SLC5A4Q9NY91 659 aa21.96■■□□□ 1.11
SHOX2-203ENST00000441443 BZW2Q9Y6E2 419 aaKnown RBP21.96■■□□□ 1.11
SHOX2-203ENST00000441443 SMNDC1O75940 238 aaKnown RBP eCLIP21.95■■□□□ 1.1
SHOX2-203ENST00000441443 SERPINB2P05120 415 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 KRT13P13646 458 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 ALADP13716 330 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 C11orf91Q3C1V1 193 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 TCERG1LQ5VWI1 586 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 ZDHHC24Q6UX98 284 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 SPZ1Q9BXG8 430 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 NSRP1Q9H0G5 558 aaKnown RBP21.95■■□□□ 1.1
SHOX2-203ENST00000441443 LAMB2P55268 1798 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 CETN3O15182 167 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 MIS18BP1Q6P0N0 1132 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 OTUD6AQ7L8S5 288 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 BMP2KQ9NSY1 1161 aaPredicted RBP21.95■■□□□ 1.1
SHOX2-203ENST00000441443 GGA1Q9UJY5 639 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 RPTORQ8N122 1335 aa21.95■■□□□ 1.1
SHOX2-203ENST00000441443 CNGA2Q16280 664 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 JAMLQ86YT9 394 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 SEPT12Q8IYM1 358 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 SAAL1Q96ER3 474 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 ARHGEF10LQ9HCE6 1279 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 PCDHA2Q9Y5H9 948 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 MARCH6O60337 910 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 GFPT2O94808 682 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 TNNI2P48788 182 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 GSTO1P78417 241 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 KIAA1755Q5JYT7 1200 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 FOXR2Q6PJQ5 311 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 C18orf8Q96DM3 657 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 GJD4Q96KN9 370 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-203ENST00000441443 EYA3Q99504 573 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 YIPF3Q9GZM5 350 aa21.94■■□□□ 1.1
SHOX2-203ENST00000441443 SPATS2LQ9NUQ6 558 aaKnown RBP21.94■■□□□ 1.1
SHOX2-203ENST00000441443 TCP11X1B4DZS4 312 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 CCND1P24385 295 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 CASP5P51878 434 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 INHBEP58166 350 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 PDIA5Q14554 519 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 CLEC10AQ8IUN9 316 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 SLC35G2Q8TBE7 412 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 USP15Q9Y4E8 981 aaPredicted RBP21.93■■□□□ 1.1
SHOX2-203ENST00000441443 AGTP01019 485 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 LDHCP07864 332 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 PDE6CP51160 858 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 C6orf118Q5T5N4 469 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 CCDC65Q8IXS2 484 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 TMOD4Q9NZQ9 345 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 ARMCX3Q9UH62 379 aaPredicted RBP21.93■■□□□ 1.1
SHOX2-203ENST00000441443 KIAA1024Q9UPX6 916 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 KIAA0391O15091 583 aaKnown RBP21.93■■□□□ 1.1
SHOX2-203ENST00000441443 DDX3YO15523 660 aaKnown RBP21.93■■□□□ 1.1
SHOX2-203ENST00000441443 RASA1P20936 1047 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 COPS2P61201 443 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 GTF2IP78347 998 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 SPDYCQ5MJ68 293 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 VPS36Q86VN1 386 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 ZBTB10Q96DT7 871 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 LZTS2Q9BRK4 669 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 IGSF9BQ9UPX0 1349 aa21.93■■□□□ 1.1
SHOX2-203ENST00000441443 RAD21O60216 631 aa21.92■■□□□ 1.1
SHOX2-203ENST00000441443 EVI5O60447 810 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms