RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 A0A0C4DFX4 3053 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 WDR81Q562E7 1941 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 BAG4O95429 457 aaKnown RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 GNA11P29992 359 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 SFNP31947 248 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CIITAP33076 1130 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 ZNF76P36508 570 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 KRT17Q04695 432 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 ITIH3Q06033 890 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CAMK1Q14012 370 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 DSC3Q14574 896 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 RTN1Q16799 776 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 APOA5Q6Q788 366 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 LRRC43Q8N309 656 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 COLGALT1Q8NBJ5 622 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CRYGNQ8WXF5 182 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 MRPS27Q92552 414 aaKnown RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 FBXL18Q96ME1 805 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 NRBP2Q9NSY0 501 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CLEC1BQ9P126 229 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CCDC39Q9UFE4 941 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 PRUNE2Q8WUY3 3088 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 TTC36A6NLP5 189 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 ZBTB43O43298 467 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 ST18O60284 1047 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 KLRC1P26715 233 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 MTHFRP42898 656 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 POLGP54098 1239 aaPredicted RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 FUT2Q10981 343 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CYP26C1Q6V0L0 522 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 CCDC148Q8NFR7 591 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 RHOBTB2Q9BYZ6 727 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 FAM49AQ9H0Q0 323 aaPredicted RBP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 TMX1Q9H3N1 280 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 SH3GLB2Q9NR46 395 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 DACT1Q9NYF0 836 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 PCDHA10Q9Y5I2 948 aa6.77□□□□□ -1.33
PTPRR-204ENST00000440835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPRR-204ENST00000440835 SMCO2A6NFE2 343 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 MARK3P27448 753 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 SP4Q02446 784 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 KCNC3Q14003 757 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 UBE2SQ16763 222 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PFKFB3Q16875 520 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 TMCO4Q5TGY1 634 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 CLEC17AQ6ZS10 378 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ZNF558Q96NG5 402 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 UIMC1Q96RL1 719 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 RIT2Q99578 217 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 JPH2Q9BR39 696 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 OSBPL7Q9BZF2 842 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ZMYND12Q9H0C1 365 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 USP15Q9Y4E8 981 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 LAMA2P24043 3122 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 IPO5O00410 1097 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 BACH1O14867 736 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 FGF18O76093 207 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 C22orf31O95567 290 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 MCM2P49736 904 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 USP11P51784 963 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 JAK3P52333 1124 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 IGBP1P78318 339 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 FOXK2Q01167 660 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ITGB3BPQ13352 177 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 SMC1AQ14683 1233 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PTPN21Q16825 1174 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ANKRD54Q6NXT1 300 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 EP400NLQ6ZTU2 488 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ALYREFQ86V81 257 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PPFIBP1Q86W92 1011 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 PLA2G4DQ86XP0 818 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 C17orf53Q8N3J3 647 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 LINC01465Q8N7H1 131 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 BORCS6Q96GS4 357 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ADAM2Q99965 735 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 INO80BQ9C086 356 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ALG13Q9NP73 1137 aaKnown RBP6.76□□□□□ -1.33
PTPRR-204ENST00000440835 SPG21Q9NZD8 308 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ST3GAL5Q9UNP4 418 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 ZNF318Q5VUA4 2279 aa6.76□□□□□ -1.33
PTPRR-204ENST00000440835 IGLV3-22A0A075B6J6 115 aa6.75□□□□□ -1.33
PTPRR-204ENST00000440835 WDR64B1ANS9 1081 aa6.75□□□□□ -1.33
PTPRR-204ENST00000440835 PROB1E7EW31 1015 aa6.75□□□□□ -1.33
PTPRR-204ENST00000440835 DHX15O43143 795 aaKnown RBP6.75□□□□□ -1.33
PTPRR-204ENST00000440835 DKC1O60832 514 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPRR-204ENST00000440835 GPR32O75388 356 aa6.75□□□□□ -1.33
PTPRR-204ENST00000440835 NRIP1P48552 1158 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms