RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 PCYT2Q99447 389 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 RNPEPQ9H4A4 650 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 IL23AQ9NPF7 189 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 ZNF302Q9NR11 478 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 SETD4Q9NVD3 440 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 KCND2Q9NZV8 630 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
UBE2F-214ENST00000440223 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
UBE2F-214ENST00000440223 PVALEFA0A1B0GWK0 134 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 SELPP16109 830 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 SARSP49591 514 aaKnown RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 ZNF200P98182 395 aaPredicted RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 MORC3Q14149 939 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 SHHQ15465 462 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 GRIK4Q16099 956 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 UNC13DQ70J99 1090 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 LRRC8DQ7L1W4 858 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 OTUD6AQ7L8S5 288 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 CCDC60Q8IWA6 550 aaPredicted RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 MLKLQ8NB16 471 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 FAM200AQ8TCP9 573 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 LRRC15Q8TF66 581 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 SCLYQ96I15 445 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
UBE2F-214ENST00000440223 MTRQ99707 1265 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 DNAJC25Q9H1X3 360 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 BHMT2Q9H2M3 363 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
UBE2F-214ENST00000440223 SCN5AQ14524 2016 aa17.77■□□□□ 0.43
UBE2F-214ENST00000440223 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 MYMKA6NI61 221 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 RRN3P2A6NIE6 340 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 TREHO43280 583 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 CAND2O75155 1236 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 TBCAO75347 108 aaKnown RBP17.76■□□□□ 0.43
UBE2F-214ENST00000440223 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 CKBP12277 381 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 PPP1R2P41236 205 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 EPHB4P54760 987 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 SLC12A3P55017 1021 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 STIM1Q13586 685 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 HIC1Q14526 733 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 PLCB4Q15147 1175 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 LRIT3Q3SXY7 679 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 C9orf50Q5SZB4 431 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 SWSAP1Q6NVH7 229 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 DDX12PQ92771 950 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 MTIF3Q9H2K0 278 aaKnown RBP17.76■□□□□ 0.43
UBE2F-214ENST00000440223 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 TRIOBPQ9H2D6 2365 aa17.76■□□□□ 0.43
UBE2F-214ENST00000440223 IDEP14735 1019 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 CASP1P29466 404 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 YWHABP31946 246 aaKnown RBP17.75■□□□□ 0.43
UBE2F-214ENST00000440223 ZNF165P49910 485 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 MRE11P49959 708 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 TPM4P67936 248 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 CT47A1Q5JQC4 288 aaPredicted RBP17.75■□□□□ 0.43
UBE2F-214ENST00000440223 DYMQ7RTS9 669 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 GAS2L3Q86XJ1 694 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 PIGOQ8TEQ8 1089 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 FAM167AQ96KS9 214 aa17.75■□□□□ 0.43
UBE2F-214ENST00000440223 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.431e-8■■■■■ 36.4
UBE2F-214ENST00000440223 RANBP2P49792 3224 aaKnown RBP17.74■□□□□ 0.43
UBE2F-214ENST00000440223 FSD2A1L4K1 749 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 HBP1O60381 514 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 RHOBTB3O94955 611 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 FGBP02675 491 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 RPLP2P05387 115 aaKnown RBP17.74■□□□□ 0.43
UBE2F-214ENST00000440223 ACRP10323 421 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 INSRRP14616 1297 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 CYP11B2P19099 503 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 THPOP40225 353 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 IGBP1P78318 339 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 ADAM17P78536 824 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 PSMD2Q13200 908 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 TRIM71Q2Q1W2 868 aaKnown RBP17.74■□□□□ 0.43
UBE2F-214ENST00000440223 DPCR1Q3MIW9 517 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 KMT5BQ4FZB7 885 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 ZNF658Q5TYW1 1059 aaPredicted RBP17.74■□□□□ 0.43
UBE2F-214ENST00000440223 ISM2Q6H9L7 571 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 TAF2Q6P1X5 1199 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 ATP8B4Q8TF62 1192 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 BPIFA3Q9BQP9 254 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 TIPINQ9BVW5 301 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 MAFBQ9Y5Q3 323 aaPredicted RBP17.74■□□□□ 0.43
UBE2F-214ENST00000440223 COL1A2P08123 1366 aa17.74■□□□□ 0.43
UBE2F-214ENST00000440223 MBLAC1A4D2B0 266 aaPredicted RBP17.73■□□□□ 0.43
UBE2F-214ENST00000440223 SMTNL1A8MU46 457 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 BECN2A8MW95 431 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 GOLGA6L19H0YKK7 550 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 ACTN1P12814 892 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 GAP43P17677 238 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
UBE2F-214ENST00000440223 PRKCEQ02156 737 aa17.73■□□□□ 0.43
UBE2F-214ENST00000440223 UGCGQ16739 394 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms