RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TMEM150BA6NC51 233 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SERPINC1P01008 464 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 INSRRP14616 1297 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SFNP31947 248 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 FANCCQ00597 558 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PRKCEQ02156 737 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 KMT5BQ4FZB7 885 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ATP8B4Q8TF62 1192 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ATP6V0A1Q93050 837 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RGL1Q9NZL6 768 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 IFNKQ9P0W0 207 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 WRAP73Q9P2S5 460 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ZKSCAN5Q9Y2L8 839 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TRIOBPQ9H2D6 2365 aa16.13■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RAG1P15918 1043 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CDK11BP21127 795 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PPP1R2P41236 205 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CCL23P55773 120 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ADAM17P78536 824 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CYP4A11Q02928 519 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PAK1Q13153 545 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MCM6Q14566 821 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 HYIQ5T013 277 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MARCH8Q5T0T0 291 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PRPF38BQ5VTL8 546 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TRIM9Q9C026 710 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 WNT8AQ9H1J5 351 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 FANCLQ9NW38 375 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 KAT6AQ92794 2004 aa16.12■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ZBTB42B2RXF5 422 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 STBD1O95210 358 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TIMP1P01033 207 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 OATP04181 439 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CTTNQ14247 550 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SPATA1Q5VX52 437 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SMYD4Q8IYR2 804 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SCLYQ96I15 445 aa16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 XPO4Q9C0E2 1151 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TANC1Q9C0D5 1861 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PSMA7O14818 248 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 KLRC4O43908 158 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SLC26A2P50443 739 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 EPHB4P54760 987 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 STX17P56962 302 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 UBASH3AP57075 661 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PTK7Q13308 1070 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 EPHA7Q15375 998 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 LBHD1Q9BQE6 289 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 EIF2AK1Q9BQI3 630 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SH2D3AQ9BRG2 576 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 LXNQ9BS40 222 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RWDD2AQ9UIY3 292 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 GDAQ9Y2T3 454 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SCN5AQ14524 2016 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
TNFRSF1A-204ENST00000440083 HBP1O60381 514 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CTSHP09668 335 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CSF2RAP15509 400 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PSMC5P62195 406 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ANKRD20A12PQ8NF67 263 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 KIAA1024Q9UPX6 916 aa16.09■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PVALEFA0A1B0GWK0 134 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MYMKA6NI61 221 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZBTB39O15060 712 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 P4HBP07237 508 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 GNAT1P11488 350 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CKBP12277 381 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ATP1A3P13637 1013 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 THPOP40225 353 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 GSDMDP57764 484 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SPAG1Q07617 926 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TRAF7Q6Q0C0 670 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms