RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SCLT1Q96NL6 688 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 ATP6V0A4Q9HBG4 840 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 BRMS1Q9HCU9 246 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 TMEM150BA6NC51 233 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 GRXCR2A6NFK2 248 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 TBKBP1A7MCY6 615 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 HOXA2O43364 376 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 DKC1O60832 514 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 ZSCAN20P17040 1043 aaPredicted RBP18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 IBSPP21815 317 aaPredicted RBP18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 KRT2P35908 639 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 QARSP47897 775 aaKnown RBP18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 DNM2P50570 870 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 HYAL1Q12794 435 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 DRP2Q13474 957 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 EARS2Q5JPH6 523 aaKnown RBP18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 ANO5Q75V66 913 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 NLRP7Q8WX94 980 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 HAS1Q92839 578 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 TNFRSF25Q93038 417 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 AAASQ9NRG9 546 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 CLDND1Q9NY35 253 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 PPME1Q9Y570 386 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 PCDHB12Q9Y5F1 795 aa18.27■□□□□ 0.52
SNRPD3-204ENST00000439775 H3BQ06 376 aaPredicted RBP18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 DTNBO60941 627 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 MAFO75444 373 aaPredicted RBP18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 FGFR1P11362 822 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 DNAJB1P25685 340 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 NEK4P51957 841 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 UBE3AQ05086 875 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 NR5A1Q13285 461 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 CSPP1Q1MSJ5 1256 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 ZNF410Q86VK4 478 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 SLFN12Q8IYM2 578 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 JPH2Q9BR39 696 aaPredicted RBP18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 FNDC1Q4ZHG4 1894 aaPredicted RBP18.26■□□□□ 0.51
SNRPD3-204ENST00000439775 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 IL9P15248 144 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 LTBRP36941 435 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 ECHDC2Q86YB7 292 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 POF1BQ8WVV4 589 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 ZNF668Q96K58 619 aaPredicted RBP18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 GCOM2Q9BZD3 368 aaPredicted RBP18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 FAM50BQ9Y247 325 aa18.25■□□□□ 0.51
SNRPD3-204ENST00000439775 A0A0U1RQF3 1178 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 FAM205CA6NFA0 338 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 LAG3P18627 525 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 SFPQP23246 707 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 EPHA7Q15375 998 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 SPOUT1Q5T280 376 aaKnown RBP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 PLA2G4FQ68DD2 849 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 EP400NLQ6ZTU2 488 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 C4orf19Q8IY42 314 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 EXOC8Q8IYI6 725 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 LRRC43Q8N309 656 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 COLGALT1Q8NBJ5 622 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 SLC7A3Q8WY07 619 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 CASD1Q96PB1 797 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 SH2D3AQ9BRG2 576 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 LXNQ9BS40 222 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 TRAIPQ9BWF2 469 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 C1QTNF1Q9BXJ1 281 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 CWH43Q9H720 699 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 CHST12Q9NRB3 414 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 RNF19AQ9NV58 838 aa18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 WRAP73Q9P2S5 460 aaPredicted RBP18.24■□□□□ 0.51
SNRPD3-204ENST00000439775 MARCH6O60337 910 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 TBX10O75333 385 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 CSPG5O95196 566 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 BAG4O95429 457 aaKnown RBP18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 SEC24BO95487 1268 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 FGFR4P22455 802 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 IRS1P35568 1242 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 ZNF598Q86UK7 904 aaKnown RBP18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 RHPN2Q8IUC4 686 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 ABI1Q8IZP0 508 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 RSPH1Q8WYR4 309 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 INO80BQ9C086 356 aaPredicted RBP18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 DHX33Q9H6R0 707 aaKnown RBP18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 HCSTQ9UBK5 93 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 LZTS1Q9Y250 596 aa18.23■□□□□ 0.51
SNRPD3-204ENST00000439775 A0A087WZ62 844 aa18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 JAK2O60674 1132 aa18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 FGF18O76093 207 aa18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 EOMESO95936 686 aa18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 ATF7P17544 494 aaPredicted RBP18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNRPD3-204ENST00000439775 RFC5P40937 340 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms