RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 DDX3YO15523 660 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 UFL1O94874 794 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 FGGP02679 453 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 RPA1P27694 616 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 CDR1P51861 262 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 PSMC6P62333 389 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 PREPLQ4J6C6 727 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 ERMARDQ5T6L9 678 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 USP17L6PQ6QN14 398 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 CXorf56Q9H5V9 222 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 LRRC4CQ9HCJ2 640 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
CDC42EP4-202ENST00000439510 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 NUDT17P0C025 328 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CHRNA5P30532 468 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 PPATQ06203 517 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 DCAF12L1Q5VU92 463 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CYB5D1Q6P9G0 228 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 GPATCH11Q8N954 259 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 RFFLQ8WZ73 363 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CCT6BQ92526 530 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 DPH5Q9H2P9 285 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 ZDHHC18Q9NUE0 388 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 TMEM253P0C7T8 217 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 GHRP10912 638 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 STAT1P42224 750 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 SCTRP47872 440 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CASP4P49662 377 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 WLSQ5T9L3 541 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 DUPD1Q68J44 220 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CCDC50Q8IVM0 306 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 MAGEC3Q8TD91 643 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 SGSM3Q96HU1 749 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 TRIM51Q9BSJ1 452 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 SYT11Q9BT88 431 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 CARD9Q9H257 536 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 EPB41L4BQ9H329 900 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 KDM4CQ9H3R0 1056 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 NR2E1Q9Y466 385 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 TBX3O15119 743 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 EVI5O60447 810 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 LMNB1P20700 586 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 RDXP35241 583 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 XRCC4Q13426 336 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 R3HDM1Q15032 1099 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 PARP9Q8IXQ6 854 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 XPO6Q96QU8 1125 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 FAM129AQ9BZQ8 928 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 OSGEPQ9NPF4 335 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 ATP8A1Q9Y2Q0 1164 aa16.56■□□□□ 0.24
CDC42EP4-202ENST00000439510 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 IFFO1Q0D2I5 559 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 KCTD1Q719H9 257 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 CHMP6Q96FZ7 201 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 NAP1L3Q99457 506 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 SOX5P35711 763 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 DR1Q01658 176 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 PPARDQ03181 441 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 PLS1Q14651 629 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 SNCBQ16143 134 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■■■■■ 31.4
CDC42EP4-202ENST00000439510 PGM2Q96G03 612 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 SERPINB13Q9UIV8 391 aa16.55■□□□□ 0.24
CDC42EP4-202ENST00000439510 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 BACH1O14867 736 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 CAND2O75155 1236 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 DNAJC8O75937 253 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 SHMT1P34896 483 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 PICALMQ13492 652 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 Q4G0T1 1027 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 ZNF317Q96PQ6 595 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 FAM187AA6NFU0 413 aa16.54■□□□□ 0.24
CDC42EP4-202ENST00000439510 MEIS1O00470 390 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms