RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 BTG3Q14201 252 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM40Q8WWA1 233 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 ADAM2Q99965 735 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 POLR3CQ9BUI4 534 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 ADAMTS10Q9H324 1103 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 DHX33Q9H6R0 707 aaKnown RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 DACT1Q9NYF0 836 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 TTC3P53804 2025 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 SIP14410 1827 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 A0A087WZ62 844 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 POTEMA6NI47 508 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 DGKIO75912 1065 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 RB1P06400 928 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 IBSPP21815 317 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 RPA1P27694 616 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 PTGDRQ13258 359 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 TFDP1Q14186 410 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 DTHD1Q6ZMT9 781 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 PPM1EQ8WY54 764 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 NLRP4Q96MN2 994 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 FDXACB1Q9BRP7 624 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 TMX1Q9H3N1 280 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 ELAC1Q9H777 363 aaKnown RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 CHST12Q9NRB3 414 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-216ENST00000439475 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
MCF2L-216ENST00000439475 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-216ENST00000439475 RFXAPO00287 272 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 HOXA2O43364 376 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 SKIP12755 728 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 PRPHP41219 470 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 RARRES1P49788 294 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 DRP2Q13474 957 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 ADGRE1Q14246 886 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 EMC2Q15006 297 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 PTPROQ16827 1216 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 BRAPQ7Z569 592 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 CATSPER3Q86XQ3 398 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM192Q8IY95 271 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 CMTR2Q8IYT2 770 aaKnown RBP11.66□□□□□ -0.54
MCF2L-216ENST00000439475 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM143Q96AN5 459 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-216ENST00000439475 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM161AQ9NX61 479 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
MCF2L-216ENST00000439475 ADGRA3Q8IWK6 1321 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 C9IYK1 514 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 BMP15O95972 392 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 SRGAP2CP0DJJ0 459 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 CCT6AP40227 531 aaKnown RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 TOB1P50616 345 aaPredicted RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 FAM189BP81408 668 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 POU5F1BQ06416 359 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 GRB10Q13322 594 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 GPM6BQ13491 265 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 SPOUT1Q5T280 376 aaKnown RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 CATSPER4Q7RTX7 472 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 ABI1Q8IZP0 508 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 C4orf32Q8N8J7 132 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 MCPH1Q8NEM0 835 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 LINC01599Q8WXQ3 324 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 C17orf80Q9BSJ5 609 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
MCF2L-216ENST00000439475 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.54
MCF2L-216ENST00000439475 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 ARHGEF35A5YM69 484 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 ZBTB39O15060 712 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 MGEA5O60502 916 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 MED24O75448 989 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 ARHGEF15O94989 841 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 EOMESO95936 686 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms