RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 MLKLQ8NB16 471 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 LMBR1Q8WVP7 490 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 IFT74Q96LB3 600 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 TSPY26PQ9H489 355 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 GPRC5CQ9NQ84 441 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 SETD4Q9NVD3 440 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 PCDH10Q9P2E7 1040 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 KCNG1Q9UIX4 513 aa22.9■■□□□ 1.26
CHD3-204ENST00000439235 TMOD1P28289 359 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 DMP1Q13316 513 aaPredicted RBP22.89■■□□□ 1.25
CHD3-204ENST00000439235 PPP2R5AQ15172 486 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 NBPF20Q3BBV1 942 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 SLC17A8Q8NDX2 589 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 TMEM143Q96AN5 459 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 SUGCTQ9HAC7 445 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 HDAC6Q9UBN7 1215 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 PHF24Q9UPV7 400 aa22.89■■□□□ 1.25
CHD3-204ENST00000439235 SFI1A8K8P3 1242 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 GJB1P08034 283 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 MAPTP10636 758 aaKnown RBP22.88■■□□□ 1.25
CHD3-204ENST00000439235 STIM1Q13586 685 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 DPCR1Q3MIW9 517 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 EFCAB12Q6NXP0 572 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 NFRKBQ6P4R8 1299 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 STXBP4Q6ZWJ1 553 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 SESTD1Q86VW0 696 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 FAM178BQ8IXR5 827 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 METTL13Q8N6R0 699 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 PSPC1Q8WXF1 523 aaKnown RBP22.88■■□□□ 1.25
CHD3-204ENST00000439235 VTI1AQ96AJ9 217 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 MRPL44Q9H9J2 332 aaKnown RBP22.88■■□□□ 1.25
CHD3-204ENST00000439235 SLC39A2Q9NP94 309 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 GDAQ9Y2T3 454 aa22.88■■□□□ 1.25
CHD3-204ENST00000439235 A0A1W2PQ45 241 aaPredicted RBP22.87■■□□□ 1.25
CHD3-204ENST00000439235 A0A1W2PQY0 241 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 MBLAC1A4D2B0 266 aaPredicted RBP22.87■■□□□ 1.25
CHD3-204ENST00000439235 KIF20AO95235 890 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 CAVIN2O95810 425 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 BMP6P22004 513 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 HOXC8P31273 242 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 ARL2P36404 184 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 SMTNP53814 917 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 SOX10P56693 466 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 PTPN11Q06124 597 aaPredicted RBP22.87■■□□□ 1.25
CHD3-204ENST00000439235 COBLL1Q53SF7 1204 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 MARCH8Q5T0T0 291 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 LRRC71Q8N4P6 559 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 U2AF1L4Q8WU68 220 aaKnown RBP22.87■■□□□ 1.25
CHD3-204ENST00000439235 NAT10Q9H0A0 1025 aaKnown RBP22.87■■□□□ 1.25
CHD3-204ENST00000439235 CRISPLD2Q9H0B8 497 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 POLD4Q9HCU8 107 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 TBC1D7Q9P0N9 293 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 GTF2IRD1Q9UHL9 959 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 PCDHA2Q9Y5H9 948 aa22.87■■□□□ 1.25
CHD3-204ENST00000439235 H0YCG3 227 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 SGPL1O95470 568 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 CAPN2P17655 700 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 NAMPTP43490 491 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 RGS19P49795 217 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 CLCN3P51790 818 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 PEX3P56589 373 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 ADAM17P78536 824 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 STK4Q13043 487 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 ALCAMQ13740 583 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 MXD4Q14582 209 aaPredicted RBP22.86■■□□□ 1.25
CHD3-204ENST00000439235 ANO6Q4KMQ2 910 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 FAM47CQ5HY64 1035 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 CT47A1Q5JQC4 288 aaPredicted RBP22.86■■□□□ 1.25
CHD3-204ENST00000439235 LINC01465Q8N7H1 131 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 KIAA0895Q8NCT3 520 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 SPIRE2Q8WWL2 714 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 HPS3Q969F9 1004 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 MAP7D2Q96T17 732 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 SEZ6LQ9BYH1 1024 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 MCOLN1Q9GZU1 580 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 DNAJC25Q9H1X3 360 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 STARD7Q9NQZ5 370 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 SUCLA2Q9P2R7 463 aaPredicted RBP22.86■■□□□ 1.25
CHD3-204ENST00000439235 SCN10AQ9Y5Y9 1956 aa22.86■■□□□ 1.25
CHD3-204ENST00000439235 A0A0U1RQG5 324 aaPredicted RBP22.85■■□□□ 1.25
CHD3-204ENST00000439235 SMIM35A0A1B0GVV1 85 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 K7ENM7 598 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 ASAP2O43150 1006 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 GCNT3O95395 438 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 TFRCP02786 760 aaKnown RBP22.85■■□□□ 1.25
CHD3-204ENST00000439235 CYP2C9P11712 490 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 SCP2P22307 547 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 ABCD1P33897 745 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 ITGA7Q13683 1181 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 SMYD4Q8IYR2 804 aaPredicted RBP22.85■■□□□ 1.25
CHD3-204ENST00000439235 ASAP3Q8TDY4 903 aa22.85■■□□□ 1.25
CHD3-204ENST00000439235 UBE4BO95155 1302 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 CCDC169A6NNP5 214 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 EIF3DO15371 548 aaKnown RBP eCLIP22.84■■□□□ 1.25
CHD3-204ENST00000439235 GLRA2P23416 452 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 NPTX2P47972 431 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 NCKAP1LP55160 1127 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 MKRN4PQ13434 485 aaPredicted RBP22.84■■□□□ 1.25
CHD3-204ENST00000439235 DRP2Q13474 957 aa22.84■■□□□ 1.25
CHD3-204ENST00000439235 TFDP1Q14186 410 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms