RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 LINC00116Q8NCU8 138 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 TOM1L1O75674 476 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CSF1RP07333 972 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 PSMC2P35998 433 aaKnown RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 RESP18Q5W5W9 173 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 TRIM50Q86XT4 487 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 PDIK1LQ8N165 341 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 HDAC11Q96DB2 347 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 FAM81BQ96LP2 452 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 ANO3Q9BYT9 981 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CCND2P30279 289 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 NEK2P51955 445 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 IGBP1P78318 339 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 CUL4BQ13620 913 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
TSC2-206ENST00000439117 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 SNX24Q9Y343 169 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 NUB1Q9Y5A7 615 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
TSC2-206ENST00000439117 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 NCF2P19878 526 aaPredicted RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 CDC25AP30304 524 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 PMS2P54278 862 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 WDR24Q96S15 920 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 CPP00450 1065 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 MRPS25P82663 173 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 POMGNT1Q8WZA1 660 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 SLC10A4Q96EP9 437 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 PALMO75781 387 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 ECE1P42892 770 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 ICA1LQ8NDH6 482 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 hCG_2014768A0A024R1R8 64 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 CFLARO15519 480 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 BRAFP15056 766 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 KPNA2P52292 529 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 TFDP1Q14186 410 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 RSPH3Q86UC2 560 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 MRPL47Q9HD33 250 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 MRPL40Q9NQ50 206 aaKnown RBP16.04■□□□□ 0.16
TSC2-206ENST00000439117 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
TSC2-206ENST00000439117 ZBBXA8MT70 800 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 KRT37O76014 449 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 IRAK1P51617 712 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 CCZ1BP86790 482 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 ITPK1Q13572 414 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 FSCBQ5H9T9 825 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 ARL2BPQ9Y2Y0 163 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 SPATA31D1Q6ZQQ2 1576 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 FAM170AA1A519 330 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 MCF2LO15068 1137 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 PLS3P13797 630 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 SCYL2Q6P3W7 929 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 HNRNPLLQ8WVV9 542 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 CALR3Q96L12 384 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 CEP19Q96LK0 163 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 TRIM15Q9C019 465 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 ZBTB5O15062 677 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 AGGF1Q8N302 714 aaeCLIP16.03■□□□□ 0.167e-8■□□□□ 8.7
TSC2-206ENST00000439117 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 PYROXD1Q8WU10 500 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 CEP95Q96GE4 821 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 APOBEC2Q9Y235 224 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 NUDCD3Q8IVD9 361 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 TAB3Q8N5C8 712 aaPredicted RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
TSC2-206ENST00000439117 TBC1D16Q8TBP0 767 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 TTC1Q99614 292 aa16.03■□□□□ 0.16
TSC2-206ENST00000439117 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 ARHGEF9O43307 516 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms