RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 KNOP1Q1ED39 458 aaKnown RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 SFMBT2Q5VUG0 894 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 B3GNT9Q6UX72 402 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 AGO4Q9HCK5 861 aaKnown RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 PEX10O60683 326 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 RNF40O75150 1001 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 TBCAO75347 108 aaKnown RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 EYA4O95677 639 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 ACTN1P12814 892 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 CXCR5P32302 372 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 MARSP56192 900 aaKnown RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 PPATQ06203 517 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 ITGB3BPQ13352 177 aaPredicted RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 ASTE1Q2TB18 679 aaPredicted RBP15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 EDRF1Q3B7T1 1238 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 SLC9C1Q4G0N8 1177 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 HSP90B2PQ58FF3 399 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 FAM133AQ8N9E0 248 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 IKZF4Q9H2S9 585 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 ACAD9Q9H845 621 aa15.19■□□□□ 0.02
PTCHD3-201ENST00000438700 NAP1L1P55209 391 aaKnown RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 COG1Q8WTW3 980 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 A1CFQ9NQ94 594 aaKnown RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 JRKLQ9Y4A0 524 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 A0A0G2JMZ2 1700 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 A0A0G2JLL6 359 aaPredicted RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 IQCA1LA6NCM1 817 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 SPDYE5A6NIY4 337 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 DHX15O43143 795 aaKnown RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 IVLP07476 585 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 CKAP4Q07065 602 aaKnown RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 EPHA7Q15375 998 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 PRRT2Q7Z6L0 340 aaPredicted RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 RABEP2Q9H5N1 569 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 WRAP73Q9P2S5 460 aaPredicted RBP15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 SNX12Q9UMY4 172 aa15.18■□□□□ 0.02
PTCHD3-201ENST00000438700 LCTP09848 1927 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 CLIC2O15247 247 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 NCK2O43639 380 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 TCERG1LQ5VWI1 586 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 ZC3H3Q8IXZ2 948 aaKnown RBP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 BANK1Q8NDB2 785 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 FAM71BQ8TC56 605 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 EDEM3Q9BZQ6 932 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 ARMCX3Q9UH62 379 aaPredicted RBP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 AKAP3O75969 853 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 MYBL2P10244 700 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 SLC9A1P19634 815 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 CASP4P49662 377 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 RINT1Q6NUQ1 792 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 EPM2AIP1Q7L775 607 aaPredicted RBP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 LXNQ9BS40 222 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 TRAF3IP3Q9Y228 551 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 KIAA1217Q5T5P2 1943 aa15.17■□□□□ 0.02
PTCHD3-201ENST00000438700 ASTN1O14525 1302 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 SERPING1P05155 500 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 NR3C2P08235 984 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 CCND2P30279 289 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 NSUN6Q8TEA1 469 aaKnown RBP15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 EHD2Q9NZN4 543 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 BTBD7Q9P203 1132 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 RPS6KA5O75582 802 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 NR3C1P04150 777 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 XRCC5P13010 732 aaKnown RBP15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 DNA2P51530 1060 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 WDR93Q6P2C0 686 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 VSIG10LQ86VR7 867 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 CREG2Q8IUH2 290 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 KSR1Q8IVT5 923 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 OPTNQ96CV9 577 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 GANQ9H2C0 597 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 ADAMTS1Q9UHI8 967 aa15.16■□□□□ 0.02
PTCHD3-201ENST00000438700 CXCL11O14625 94 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 CALUO43852 315 aaPredicted RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 ATP9AO75110 1047 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 MUTP22033 750 aa15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 NMT1P30419 496 aaKnown RBP15.15■□□□□ 0.02
PTCHD3-201ENST00000438700 MAGEA9P43362 315 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms