RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CARD11Q9BXL7 1154 aa5.1□□□□□ -1.59
LSM1P1-201ENST00000438629 SEMA4AQ9H3S1 761 aa5.1□□□□□ -1.59
LSM1P1-201ENST00000438629 MTG2Q9H4K7 406 aa5.1□□□□□ -1.59
LSM1P1-201ENST00000438629 PCDHB6Q9Y5E3 794 aa5.1□□□□□ -1.59
LSM1P1-201ENST00000438629 MRFAP1Q9Y605 127 aa5.1□□□□□ -1.59
LSM1P1-201ENST00000438629 TRIM75PA6NK02 468 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 DAPK3O43293 454 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 OPHN1O60890 802 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 H2AFYO75367 372 aaKnown RBP5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 PCDH8O95206 1070 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 HMGCRP04035 888 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 PFKMP08237 780 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 CCND1P24385 295 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 MEOX1P50221 254 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 SLURP1P55000 103 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 NRG3P56975 720 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 KRT85P78386 507 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 TOP3AQ13472 1001 aaPredicted RBP5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 CT83Q5H943 113 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 CCDC62Q6P9F0 684 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 PGM2L1Q6PCE3 622 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 SIAH1Q8IUQ4 282 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 SP8Q8IXZ3 490 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 NUDT10Q8NFP7 164 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 OR14C36Q8NHC7 312 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 NUDT11Q96G61 164 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 DYDC2Q96IM9 177 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 OSBPL6Q9BZF3 934 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 TRIM8Q9BZR9 551 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 KATNBL1Q9H079 304 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 MS4A5Q9H3V2 200 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 METTL14Q9HCE5 456 aaKnown RBP5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 PPP2R3BQ9Y5P8 575 aa5.09□□□□□ -1.59
LSM1P1-201ENST00000438629 LCHNA4D1U4 455 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 MROH6A6NGR9 719 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 FSBPO95073 299 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 S100BP04271 92 aaPredicted RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 CFPP27918 469 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ADCY8P40145 1251 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 GPR3P46089 330 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 KCNQ1P51787 676 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 SLC5A3P53794 718 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 GJA9P57773 515 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 SPIDRQ14159 915 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 USP10Q14694 798 aaKnown RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 INAVAQ3KP66 663 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ZMAT1Q5H9K5 638 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ZBTB41Q5SVQ8 909 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 TRIM68Q6AZZ1 485 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 BORAQ6PGQ7 559 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 UNQ6494/PRO21346Q6UXR6 183 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ZNF761Q86XN6 746 aaPredicted RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 RTKN2Q8IZC4 609 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 TP53I13Q8NBR0 393 aaPredicted RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 OR5AN1Q8NGI8 311 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 STAG1Q8WVM7 1258 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 GAB3Q8WWW8 586 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 LPPQ93052 612 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 EAF2Q96CJ1 260 aaPredicted RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 FAXDC2Q96IV6 333 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 WDR92Q96MX6 357 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ASPSCR1Q9BZE9 553 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 SLC13A1Q9BZW2 595 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 HAPLN2Q9GZV7 340 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 LUC7LQ9NQ29 371 aaKnown RBP5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 MKS1Q9NXB0 559 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 PRSS50Q9UI38 385 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ADAM29Q9UKF5 820 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 USP18Q9UMW8 372 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 ZDHHC9Q9Y397 364 aa5.08□□□□□ -1.6
LSM1P1-201ENST00000438629 A0A1B0GTL3 188 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 E2F8A0AVK6 867 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 KLHL33A6NCF5 533 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 GABRDO14764 452 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 SASH1O94885 1247 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 CLEC2LP0C7M8 214 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 MYBL2P10244 700 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 RBP3P10745 1247 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 LGALS4P56470 323 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 VMACQ2NL98 169 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 ANO4Q32M45 955 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 PLEKHG6Q3KR16 790 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 ZNF568Q3ZCX4 644 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 PITRM1Q5JRX3 1037 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 FAM180AQ6UWF9 173 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 C1orf162Q8NEQ5 155 aaPredicted RBP5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 AUTS2Q8WXX7 1259 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 FUBP3Q96I24 572 aaKnown RBP eCLIP5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 SPATA25Q9BR10 227 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 POLR3BQ9NW08 1133 aaPredicted RBP5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 DNAJC28Q9NX36 388 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 CDC42EP3Q9UKI2 254 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 TMPRSS11EQ9UL52 423 aa5.07□□□□□ -1.6
LSM1P1-201ENST00000438629 NEK2P51955 445 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms