RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 GOLGA8JA6NMD2 632 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 I3L4J1 428 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 SLC26A4O43511 780 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 EVI5O60447 810 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 FAM107AO95990 144 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 NFIXQ14938 502 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 TMED2Q15363 201 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 CTAGE3PQ8IX95 158 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 RPUSD2Q8IZ73 545 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 KIAA0895Q8NCT3 520 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GDAP1Q8TB36 358 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 REEP2Q9BRK0 252 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 STK33Q9BYT3 514 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 JMJD4Q9H9V9 463 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 MRPL47Q9HD33 250 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 KMT5AQ9NQR1 393 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GPR75-ASB3A0A0A6YYF3 556 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 SMIM22K7EJ46 135 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 RFX1P22670 979 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 NMT1P30419 496 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PIK3CAP42336 1068 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CRKP46108 304 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ACTN3Q08043 901 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PTGISQ16647 500 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 HADHQ16836 314 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 AGBL2Q5U5Z8 902 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 KLHDC7AQ5VTJ3 777 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CCDC137Q6PK04 289 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 KDM7AQ6ZMT4 941 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 KSR1Q8IVT5 923 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PROCA1Q8NCQ7 364 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CASKIN2Q8WXE0 1202 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 N4BP2L2Q92802 583 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 MTMR8Q96EF0 704 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TRIM51Q9BSJ1 452 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 RGL1Q9NZL6 768 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CNOT8Q9UFF9 292 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ATRNO75882 1429 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TBX3O15119 743 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PEX3P56589 373 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 KIAA1755Q5JYT7 1200 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TRIM68Q6AZZ1 485 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 SLC35G2Q8TBE7 412 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF507Q8TCN5 953 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 HDAC7Q8WUI4 952 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CAVIN3Q969G5 261 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CFAP57Q96MR6 1250 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 VCXQ9H320 206 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TMOD4Q9NZQ9 345 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ANAPC7Q9UJX3 599 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PCDHB4Q9Y5E5 795 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 NFAT5O94916 1531 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 XRN1Q8IZH2 1706 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 EXOC1LA0A1B0GW35 172 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 FRMD3A2A2Y4 597 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 VAMP7P51809 220 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 GNPTABQ3T906 1256 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CREG2Q8IUH2 290 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CDAN1Q8IWY9 1227 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ATP6V0A1Q93050 837 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PICK1Q9NRD5 415 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 IL17RBQ9NRM6 502 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 SUCLA2Q9P2R7 463 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CLRN2A0PK11 232 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 LRRIQ4A6NIV6 560 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ABL1P00519 1130 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 MYBP10242 640 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 VEGFAP15692 232 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CYP11B2P19099 503 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 RPA1P27694 616 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TMOD1P28289 359 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 POLR2BP30876 1174 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 GCKP35557 465 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 HSD17B3P37058 310 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 FMO5P49326 533 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 YWHAEP62258 255 aaKnown RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 AMPD2Q01433 879 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 MUM1Q2TAK8 710 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 WDR59Q6PJI9 974 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 RNF207Q6ZRF8 634 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PHLDB2Q86SQ0 1253 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 FAM160B2Q86V87 743 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 METTL13Q8N6R0 699 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 LINC00116Q8NCU8 138 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF564Q8TBZ8 553 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-205ENST00000438362 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CYFIP2Q96F07 1278 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 CEP170P1Q96L14 293 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 AGPAT1Q99943 283 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TLR10Q9BXR5 811 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 WNT8AQ9H1J5 351 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 TXLNGQ9NUQ3 528 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 SERPINA10Q9UK55 444 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PNMA2Q9UL42 364 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 SUGT1Q9Y2Z0 365 aa7.19□□□□□ -1.26
CSDE1-205ENST00000438362 PDE2AO00408 941 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms