RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CYP27A1Q02318 531 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 PPP2R5AQ15172 486 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 KSR1Q8IVT5 923 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 SYCP3Q8IZU3 236 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 OPTNQ96CV9 577 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 ACCSQ96QU6 501 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 IFIH1Q9BYX4 1025 aaKnown RBP28.14■■■□□ 2.09
CPNE1-216ENST00000437340 LACRTQ9GZZ8 138 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 JPH1Q9HDC5 661 aaPredicted RBP28.14■■■□□ 2.09
CPNE1-216ENST00000437340 PCDHA13Q9Y5I0 950 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 A0A0G2JLL6 359 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-216ENST00000437340 PSAPP07602 524 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 PON1P27169 355 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 GTF2BQ00403 316 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 PPIL2Q13356 520 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 XKR9Q5GH70 373 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 KLHDC7AQ5VTJ3 777 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 PRRT2Q7Z6L0 340 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-216ENST00000437340 C12orf56Q8IXR9 622 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 CEP112Q8N8E3 955 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 A0A0G2JMZ2 1700 aa28.13■■■□□ 2.09
CPNE1-216ENST00000437340 RCCD1A6NED2 376 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 RBAK-RBAKDNI3L0D1 243 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 CXCL11O14625 94 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 TLR2O60603 784 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 STXBP2Q15833 593 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 MAEAQ7L5Y9 396 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 SLC9A2Q9UBY0 812 aa28.12■■■□□ 2.09
CPNE1-216ENST00000437340 EIF3JO75822 258 aaKnown RBP28.11■■■□□ 2.09
CPNE1-216ENST00000437340 UCHL3P15374 230 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 SLC9A1P19634 815 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 ICAM3P32942 547 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 UTP14CQ5TAP6 766 aaKnown RBP28.11■■■□□ 2.09
CPNE1-216ENST00000437340 ANKRD35Q8N283 1001 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 IKZF4Q9H2S9 585 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 KCNH4Q9UQ05 1017 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 NCKAP1LP55160 1127 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 ANO5Q75V66 913 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 GBA2Q9HCG7 927 aaPredicted RBP28.11■■■□□ 2.09
CPNE1-216ENST00000437340 GABBR1Q9UBS5 961 aa28.11■■■□□ 2.09
CPNE1-216ENST00000437340 PJA2O43164 708 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 CELF2O95319 508 aaKnown RBP28.1■■■□□ 2.09
CPNE1-216ENST00000437340 GJA5P36382 358 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 TUBB4BP68371 445 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 AMPD2Q01433 879 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 RAPGEF1Q13905 1077 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 WHAMMP3Q1A5X7 153 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 TDRD12Q587J7 1177 aaKnown RBP28.1■■■□□ 2.09
CPNE1-216ENST00000437340 RSRC2Q7L4I2 434 aaKnown RBP28.1■■■□□ 2.09
CPNE1-216ENST00000437340 SRGAP1Q7Z6B7 1085 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 C17orf75Q9HAS0 396 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 BTBD7Q9P203 1132 aa28.1■■■□□ 2.09
CPNE1-216ENST00000437340 CYP2J2P51589 502 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 GADL1Q6ZQY3 521 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 HAUS6Q7Z4H7 955 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 SECISBP2LQ93073 1101 aaKnown RBP28.09■■■□□ 2.09
CPNE1-216ENST00000437340 HVCN1Q96D96 273 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 LUC7LQ9NQ29 371 aaKnown RBP28.09■■■□□ 2.09
CPNE1-216ENST00000437340 TFR2Q9UP52 801 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 BZW2Q9Y6E2 419 aaKnown RBP28.09■■■□□ 2.09
CPNE1-216ENST00000437340 EXOC3O60645 756 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 NPEPPSP55786 919 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 FKBP1BP68106 108 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 APBA1Q02410 837 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 ASIC2Q16515 512 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 PLA2G4FQ68DD2 849 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 CHADLQ6NUI6 762 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 ABHD15Q6UXT9 468 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 KIFAP3Q92845 792 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 SPATC1LQ9H0A9 340 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 GCNT4Q9P109 453 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 DAAM1Q9Y4D1 1078 aa28.09■■■□□ 2.09
CPNE1-216ENST00000437340 KIAA1217Q5T5P2 1943 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 ANO9A1A5B4 782 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 TMEM150BA6NC51 233 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 STBD1O95210 358 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 ITGBL1O95965 494 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-216ENST00000437340 ACTN1P12814 892 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 MAGEA1P43355 309 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 IRX3P78415 501 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-216ENST00000437340 FAM102BQ5T8I3 360 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 SLC10A4Q96EP9 437 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 SPAG5Q96R06 1193 aa28.08■■■□□ 2.09
CPNE1-216ENST00000437340 UNCXA6NJT0 531 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 MAPK13O15264 365 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 ZNF862O60290 1169 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 FMO5P49326 533 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 SMTNP53814 917 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 ACTR2P61160 394 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 MIS18BP1Q6P0N0 1132 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 TRIM58Q8NG06 486 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 GOLGA1Q92805 767 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 SIX2Q9NPC8 291 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 LCTP09848 1927 aa28.07■■■□□ 2.08
CPNE1-216ENST00000437340 ALDH5A1P51649 535 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 PEX3P56589 373 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 KLHL30Q0D2K2 578 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 BFSP1Q12934 665 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 PAPD7Q5XG87 772 aaKnown RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 SWSAP1Q6NVH7 229 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms