RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GNGT2O14610 69 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 CDO1Q16878 200 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 SLITRK6Q9H5Y7 841 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
PTPN13-204ENST00000436978 MAP3K20Q9NYL2 800 aaKnown RBP16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 SPDL1Q96EA4 605 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 FTCDO95954 541 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GANCQ8TET4 914 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 USP31Q70CQ4 1352 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 UBE4BO95155 1302 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 COASYQ13057 564 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 RHPN2Q8IUC4 686 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 FAF2Q96CS3 445 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 ORC4O43929 436 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 P4HBP07237 508 aaKnown RBP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 PSMC5P62195 406 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 SNCBQ16143 134 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 SF3A3Q12874 501 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 NAALADL2Q58DX5 795 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 GDAP1Q8TB36 358 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 IFT43Q96FT9 208 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 MFAP3LO75121 409 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 RCN2Q14257 317 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 ADAM22Q9P0K1 906 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 PRDX5P30044 214 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 DRP2Q13474 957 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 ACRBPQ8NEB7 543 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
PTPN13-204ENST00000436978 PLA2G12BQ9BX93 195 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 TOM1L1O75674 476 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 IGKV5-2P06315 115 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 CXCR5P32302 372 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 MORC4Q8TE76 937 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 TUFT1Q9NNX1 390 aa16.97■□□□□ 0.31
PTPN13-204ENST00000436978 PVALEFA0A1B0GWK0 134 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 SMARCA1P28370 1054 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 GPC5P78333 572 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 NR1H3Q13133 447 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 DDX56Q9NY93 547 aaKnown RBP16.96■□□□□ 0.31
PTPN13-204ENST00000436978 TMEM247A6NEH6 219 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 MAP3K7O43318 606 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 VAMP7P51809 220 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 DDX50Q9BQ39 737 aaKnown RBP16.96■□□□□ 0.31
PTPN13-204ENST00000436978 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
PTPN13-204ENST00000436978 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.31
PTPN13-204ENST00000436978 ANAPC7Q9UJX3 599 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L15C9J2P7 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L13C9JLJ4 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L11C9JVI0 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L18D6R9N7 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L22D6RA61 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L17D6RBQ6 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L19D6RCP7 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L20D6RJB6 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 USP17L24Q0WX57 530 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 ART3Q13508 389 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
PTPN13-204ENST00000436978 CYB5R4Q7L1T6 521 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 LGALS16A8MUM7 142 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 CYP2D6P10635 497 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 CDC25AP30304 524 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 CACNB3P54284 484 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 SLC13A4Q9UKG4 626 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 GDAQ9Y2T3 454 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 SPTLC3Q9NUV7 552 aa16.96■□□□□ 0.31
PTPN13-204ENST00000436978 DNAJC12Q9UKB3 198 aa16.96■□□□□ 0.3
PTPN13-204ENST00000436978 STAP1Q9ULZ2 295 aa16.96■□□□□ 0.3
PTPN13-204ENST00000436978 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
PTPN13-204ENST00000436978 ARL4CP56559 192 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 ALKBH5Q6P6C2 394 aaKnown RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 LXNQ9BS40 222 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 NNMTP40261 264 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 IP6K2Q9UHH9 426 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 KCTD16Q68DU8 428 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 POTEMA6NI47 508 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 RASGRF2O14827 1237 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 KRT7P08729 469 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 INPP1P49441 399 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 SESN3P58005 492 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 ACAP3Q96P50 834 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 JPH1Q9HDC5 661 aaPredicted RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 LPAR1Q92633 364 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 PPWD1Q96BP3 646 aaKnown RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 RPAP3Q9H6T3 665 aaPredicted RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 KLHL8Q9P2G9 620 aaPredicted RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 KIAA0391O15091 583 aaKnown RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 SFR1Q86XK3 245 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 SCG3Q8WXD2 468 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms