RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CCDC94Q9BW85 323 aaPredicted RBP23.18■■□□□ 1.3
PTPRF-207ENST00000436724 MORF4L1Q9UBU8 362 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 CCDC169A6NNP5 214 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 OATP04181 439 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 FECHP22830 423 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 CYP2J2P51589 502 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 KCNH2Q12809 1159 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 ARMCX2Q7L311 632 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 FRMD5Q7Z6J6 570 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 OR8K1Q8NGG5 319 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 DNAJC7Q99615 494 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 CHP1Q99653 195 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 NUP58Q9BVL2 599 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 NAA15Q9BXJ9 866 aaKnown RBP23.17■■□□□ 1.3
PTPRF-207ENST00000436724 PDLIM7Q9NR12 457 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 PPP2R2CQ9Y2T4 447 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 MAPTP10636 758 aaKnown RBP23.17■■□□□ 1.3
PTPRF-207ENST00000436724 NPTX2P47972 431 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 ZNF792Q3KQV3 632 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 RETREG2Q8NC44 543 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 MORC4Q8TE76 937 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 ZNF592Q92610 1267 aa23.17■■□□□ 1.3
PTPRF-207ENST00000436724 PARK7Q99497 189 aaKnown RBP23.17■■□□□ 1.3
PTPRF-207ENST00000436724 DGAT1O75907 488 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 ZNF157P51786 506 aaPredicted RBP23.16■■□□□ 1.3
PTPRF-207ENST00000436724 NCKAP1LP55160 1127 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 APBA1Q02410 837 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 DCAF17Q5H9S7 520 aaPredicted RBP23.16■■□□□ 1.3
PTPRF-207ENST00000436724 CCDC62Q6P9F0 684 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 REXO1L1PQ8IX06 675 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 PLXNA1Q9UIW2 1896 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 EPB41P11171 864 aaKnown RBP23.16■■□□□ 1.3
PTPRF-207ENST00000436724 GTF2BQ00403 316 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 NCBP1Q09161 790 aaKnown RBP23.16■■□□□ 1.3
PTPRF-207ENST00000436724 WDR59Q6PJI9 974 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 TRIM50Q86XT4 487 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 SEPT1Q8WYJ6 367 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 IVNS1ABPQ9Y6Y0 642 aa23.16■■□□□ 1.3
PTPRF-207ENST00000436724 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
PTPRF-207ENST00000436724 XRCC5P13010 732 aaKnown RBP23.15■■□□□ 1.3
PTPRF-207ENST00000436724 STAT5BP51692 787 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 DMP1Q13316 513 aaPredicted RBP23.15■■□□□ 1.3
PTPRF-207ENST00000436724 FIGNQ5HY92 759 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 CELF3Q5SZQ8 465 aaKnown RBP23.15■■□□□ 1.3
PTPRF-207ENST00000436724 TCERG1LQ5VWI1 586 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 GPR142Q7Z601 462 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 TMEM161BQ8NDZ6 487 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 ATP6V0A4Q9HBG4 840 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 FAM184BQ9ULE4 1060 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 TRPM7Q96QT4 1865 aa23.15■■□□□ 1.3
PTPRF-207ENST00000436724 ASB14A6NK59 587 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 SLC16A3O15427 465 aaKnown RBP23.14■■□□□ 1.3
PTPRF-207ENST00000436724 NFIL3Q16649 462 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 RASAL3Q86YV0 1011 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 GPIHBP1Q8IV16 184 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 KIFAP3Q92845 792 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 BORCS6Q96GS4 357 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 ACCSQ96QU6 501 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 GPR20Q99678 358 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 PCIF1Q9H4Z3 704 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 DMAC2Q9NW81 257 aa23.14■■□□□ 1.3
PTPRF-207ENST00000436724 ADGRA3Q8IWK6 1321 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.29
PTPRF-207ENST00000436724 POLGP54098 1239 aaPredicted RBP23.14■■□□□ 1.29
PTPRF-207ENST00000436724 ZBED6P86452 979 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 GJC2Q5T442 439 aaPredicted RBP23.14■■□□□ 1.29
PTPRF-207ENST00000436724 KCNV1Q6PIU1 500 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 CYP26C1Q6V0L0 522 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 FAM186BQ8IYM0 893 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 RDH13Q8NBN7 331 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 MCPH1Q8NEM0 835 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 ST6GALNAC4Q9H4F1 302 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 TMEM206Q9H813 350 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 CENPFP49454 3210 aa23.14■■□□□ 1.29
PTPRF-207ENST00000436724 A0A0U1RQJ8 604 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 NOP56O00567 594 aaKnown RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 MARK3P27448 753 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 PSMC2P35998 433 aaKnown RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 ALCAMQ13740 583 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 EMC2Q15006 297 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 DHX37Q8IY37 1157 aaKnown RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 PDCL2Q8N4E4 241 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 ATRIPQ8WXE1 791 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 SLC35C1Q96A29 364 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 TMEM143Q96AN5 459 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 SPATA33Q96N06 139 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 CBWD1Q9BRT8 395 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 KMT5AQ9NQR1 393 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 CPA4Q9UI42 421 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 SMTNP53814 917 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 NAA30Q147X3 362 aaPredicted RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 FAM110CQ1W6H9 321 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 SAPCD2Q86UD0 394 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 ZSWIM2Q8NEG5 633 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 CEP89Q96ST8 783 aa23.13■■□□□ 1.29
PTPRF-207ENST00000436724 POLR3FQ9H1D9 316 aaPredicted RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 METTL14Q9HCE5 456 aaKnown RBP23.13■■□□□ 1.29
PTPRF-207ENST00000436724 ADGRG1Q9Y653 693 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms