RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PPFIA4O75335 1185 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 EIF3JO75822 258 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 F2P00734 622 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 RB1P06400 928 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 RSPH10BP0C881 870 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 PDHBP11177 359 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 HOXD8P13378 290 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF543Q08ER8 600 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 ALX1Q15699 326 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 SMAD2Q15796 467 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 PLEKHG4Q58EX7 1191 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 TCEAL5Q5H9L2 206 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 GPATCH4Q5T3I0 446 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.81□□□□□ -0.846e-6■■■□□ 19.1
NIF3L1-208ENST00000436412 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 BMP8AQ7Z5Y6 402 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 FBXO11Q86XK2 927 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 MCF2L2Q86YR7 1114 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 TMEM192Q8IY95 271 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 DBF4BQ8NFT6 615 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 TOP1MTQ969P6 601 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 YME1L1Q96TA2 773 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 SEC62Q99442 399 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 ALG1Q9BT22 464 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 LMAN2LQ9H0V9 348 aa9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-208ENST00000436412 COL4A6Q14031 1691 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 VPS13AQ96RL7 3174 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 CAND2O75155 1236 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 SNHG28P0DPA3 235 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 ALAS2P22557 587 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 GRNP28799 593 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 RTN1Q16799 776 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 TSHZ3Q63HK5 1081 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 KCNV1Q6PIU1 500 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 EP400NLQ6ZTU2 488 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 SERINC5Q86VE9 423 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 SYTL5Q8TDW5 730 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 SEPT8Q92599 483 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 RMDN3Q96TC7 470 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 FSD1Q9BTV5 496 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 DCTPP1Q9H773 170 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 INCENPQ9NQS7 918 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 CLDND1Q9NY35 253 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 MYH7BA7E2Y1 1941 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 ABCB11O95342 1321 aa9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-208ENST00000436412 MYO15AQ9UKN7 3530 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 C5orf67F2Z3F1 127 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 FOXP2O15409 715 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 ALBP02768 609 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 PCP11498 1178 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 WEE1P30291 646 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 LTBRP36941 435 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 THPOP40225 353 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 SMAD4Q13485 552 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 IER5Q5VY09 327 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 RPAINQ86UA6 219 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 EDAQ92838 391 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 APBB2Q92870 758 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 WNT8BQ93098 351 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 TAAR1Q96RJ0 339 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 C11orf84Q9BUA3 381 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 MRVI1Q9Y6F6 885 aa9.79□□□□□ -0.84
NIF3L1-208ENST00000436412 M0R082 166 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 MBTPS2O43462 519 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF286BP0CG31 522 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 TGFB3P10600 412 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ADH7P40394 386 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 NT5C2P49902 561 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF200P98182 395 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 USH1GQ495M9 461 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 XP32Q5T750 250 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ARHGEF16Q5VV41 709 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 TICAM2Q86XR7 235 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 IL17RAQ96F46 866 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 ZNF587Q96SQ5 575 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 IFIH1Q9BYX4 1025 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 IRF2BPLQ9H1B7 796 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 MUTYHQ9UIF7 546 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 MRPL11Q9Y3B7 192 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
NIF3L1-208ENST00000436412 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 C17orf102A2RUQ5 167 aa9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 HSPD1P10809 573 aaKnown RBP9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 HOXC8P31273 242 aa9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 BMPR1AP36894 532 aa9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 CDC37Q16543 378 aaPredicted RBP9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 HIF1AQ16665 826 aa9.77□□□□□ -0.85
NIF3L1-208ENST00000436412 CCDC178Q5BJE1 867 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms