RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 H3BNC9 293 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 CD2BP2O95400 341 aaKnown RBP20.49■□□□□ 0.87
HMGN1-207ENST00000436324 DARSP14868 501 aaKnown RBP20.49■□□□□ 0.87
HMGN1-207ENST00000436324 YWHABP31946 246 aaKnown RBP20.49■□□□□ 0.87
HMGN1-207ENST00000436324 BMPR1AP36894 532 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 TFF2Q03403 129 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 DSC3Q14574 896 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 XKR9Q5GH70 373 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 SLC24A5Q71RS6 500 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 KSR1Q8IVT5 923 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 C4orf19Q8IY42 314 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 MTMR9Q96QG7 549 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 FOXP1Q9H334 677 aaPredicted RBP20.49■□□□□ 0.87
HMGN1-207ENST00000436324 ZSWIM4Q9H7M6 989 aa20.49■□□□□ 0.87
HMGN1-207ENST00000436324 MRPL42Q9Y6G3 142 aaKnown RBP20.49■□□□□ 0.87
HMGN1-207ENST00000436324 A0A087WZ62 844 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 C9IYK1 514 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 SLITRK3O94933 977 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 ZSCAN20P17040 1043 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 POLGP54098 1239 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 FAM102BQ5T8I3 360 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 OTUD6AQ7L8S5 288 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 ZNF710Q8N1W2 664 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 ATXN2LQ8WWM7 1075 aaKnown RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 TMEM143Q96AN5 459 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 NLRP4Q96MN2 994 aa20.48■□□□□ 0.87
HMGN1-207ENST00000436324 JPH2Q9BR39 696 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 FDXACB1Q9BRP7 624 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 GCOM2Q9BZD3 368 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-207ENST00000436324 CHD7Q9P2D1 2997 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 A0A087WWV3 80 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 POTEMA6NI47 508 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 TBKBP1A7MCY6 615 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 CSPG5O95196 566 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 MRPS5P82675 430 aaKnown RBP20.47■□□□□ 0.87
HMGN1-207ENST00000436324 PTPROQ16827 1216 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 TJAP1Q5JTD0 557 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 NOSTRINQ8IVI9 506 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 SLC7A3Q8WY07 619 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 CLP1Q92989 425 aaKnown RBP20.47■□□□□ 0.87
HMGN1-207ENST00000436324 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
HMGN1-207ENST00000436324 TBC1D32Q96NH3 1257 aa20.47■□□□□ 0.87
HMGN1-207ENST00000436324 COL4A6Q14031 1691 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 FGFR1P11362 822 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 CDC42EP1Q00587 391 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 NBR1Q14596 966 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 TTC38Q5R3I4 469 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 RNF169Q8NCN4 708 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 ASB2Q96Q27 587 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 HSD17B14Q9BPX1 270 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 DHX33Q9H6R0 707 aaKnown RBP20.46■□□□□ 0.87
HMGN1-207ENST00000436324 ATP6V0A4Q9HBG4 840 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 RWDD3Q9Y3V2 267 aa20.46■□□□□ 0.87
HMGN1-207ENST00000436324 GRM6O15303 877 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 RB1P06400 928 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 RFC5P40937 340 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 TECP42680 631 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 FAM189BP81408 668 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 SPOUT1Q5T280 376 aaKnown RBP20.45■□□□□ 0.86
HMGN1-207ENST00000436324 FAM43BQ6ZT52 329 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-207ENST00000436324 C11orf84Q9BUA3 381 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-207ENST00000436324 RNF216Q9NWF9 866 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-207ENST00000436324 COL4A3BPQ9Y5P4 624 aa20.45■□□□□ 0.86
HMGN1-207ENST00000436324 C5orf67F2Z3F1 127 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 SRGAP2CP0DJJ0 459 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 EMC2Q15006 297 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 ZNF410Q86VK4 478 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 EXOC8Q8IYI6 725 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 IL27Q8NEV9 243 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 PIGOQ8TEQ8 1089 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 PRPF31Q8WWY3 499 aaKnown RBP20.44■□□□□ 0.86
HMGN1-207ENST00000436324 HLA-CQ95604 372 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 ALG13Q9NP73 1137 aaKnown RBP20.44■□□□□ 0.86
HMGN1-207ENST00000436324 TMEM161AQ9NX61 479 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 HCSTQ9UBK5 93 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 NOL7Q9UMY1 257 aaKnown RBP20.44■□□□□ 0.86
HMGN1-207ENST00000436324 PPME1Q9Y570 386 aa20.44■□□□□ 0.86
HMGN1-207ENST00000436324 OR52Z1P0C646 297 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 SFPQP23246 707 aaKnown RBP eCLIP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 CATSPER4Q7RTX7 472 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 ECHDC2Q86YB7 292 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 NEK9Q8TD19 979 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 PSPC1Q8WXF1 523 aaKnown RBP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 SYMPKQ92797 1274 aaKnown RBP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 CCDC43Q96MW1 224 aaKnown RBP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 MTRQ99707 1265 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 INO80BQ9C086 356 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 ELAC1Q9H777 363 aaKnown RBP20.43■□□□□ 0.86
HMGN1-207ENST00000436324 COG5Q9UP83 839 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
HMGN1-207ENST00000436324 LYPLA2O95372 231 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 GJB2P29033 226 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 KCNQ1P51787 676 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 LAMTOR4Q0VGL1 99 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 TCEAL5Q5H9L2 206 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms