RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 TSG101Q99816 390 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 TUT1Q9H6E5 874 aaKnown RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 POLD4Q9HCU8 107 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 PCDHB13Q9Y5F0 798 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 PDXKO00764 312 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 SEPT4O43236 478 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 ADCY5O95622 1261 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 F2P00734 622 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 HMGCRP04035 888 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 MARK3P27448 753 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 ABCD1P33897 745 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 HOXD13P35453 343 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 MAP3K21Q5TCX8 1036 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 ZNF296Q8WUU4 475 aaPredicted RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 MRFAP1L1Q96HT8 127 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 UPF3AQ9H1J1 476 aaKnown RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 GPRC5CQ9NQ84 441 aa16.65■□□□□ 0.26
TMEM40-204ENST00000435218 TRIP12Q14669 1992 aaPredicted RBP16.65■□□□□ 0.26
TMEM40-204ENST00000435218 ADCY3O60266 1144 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 FGFR1OPO95684 399 aaKnown RBP16.64■□□□□ 0.25
TMEM40-204ENST00000435218 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 ARL2P36404 184 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 SMTNP53814 917 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 GJA9P57773 515 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 GTF2BQ00403 316 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 FANCCQ00597 558 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 DMP1Q13316 513 aaPredicted RBP16.64■□□□□ 0.25
TMEM40-204ENST00000435218 NFIL3Q16649 462 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 MAEAQ7L5Y9 396 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 TRIM5Q9C035 493 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 RNPEPQ9H4A4 650 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 TYW1Q9NV66 732 aaKnown RBP16.64■□□□□ 0.25
TMEM40-204ENST00000435218 TRPC6Q9Y210 931 aa16.64■□□□□ 0.25
TMEM40-204ENST00000435218 LRRC10BA6NIK2 292 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 H0YCG3 227 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 K7ENM7 598 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 PRPF6O94906 941 aaKnown RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 CDC25BP30305 580 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 NPTX2P47972 431 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 ZNF75DP51815 510 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 PEX3P56589 373 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 IER5Q5VY09 327 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 IRF2BP1Q8IU81 584 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 SRRTQ9BXP5 876 aaKnown RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 POLR3FQ9H1D9 316 aaPredicted RBP16.63■□□□□ 0.25
TMEM40-204ENST00000435218 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
TMEM40-204ENST00000435218 KPNA6O60684 536 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 NAMPTP43490 491 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 PLCB2Q00722 1185 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 LRRC55Q6ZSA7 311 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
TMEM40-204ENST00000435218 HAUS6Q7Z4H7 955 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 NELFCDQ8IXH7 590 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 RAET1EQ8TD07 263 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 BSNDQ8WZ55 320 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 LENG1Q96BZ8 264 aaPredicted RBP16.62■□□□□ 0.25
TMEM40-204ENST00000435218 CEP63Q96MT8 703 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 BEGAINQ9BUH8 593 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 TMEM206Q9H813 350 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 ARHGAP28Q9P2N2 729 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 LIMA1Q9UHB6 759 aaKnown RBP16.62■□□□□ 0.25
TMEM40-204ENST00000435218 HTTP42858 3142 aa16.62■□□□□ 0.25
TMEM40-204ENST00000435218 HAS3O00219 553 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 MAGEB2O15479 319 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 CBFA2T2O43439 604 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 C22orf31O95567 290 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 INSRRP14616 1297 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 ELNP15502 786 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 SOX10P56693 466 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 TRIM32Q13049 653 aa16.61■□□□□ 0.25
TMEM40-204ENST00000435218 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 ZC2HC1CQ53FD0 456 aaPredicted RBP16.61■□□□□ 0.25
TMEM40-204ENST00000435218 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms