RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
TREX1-201ENST00000433541 PRO3102Q9H379 93 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 CCDC39Q9UFE4 941 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 COL4A3BPQ9Y5P4 624 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 GBF1Q92538 1859 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 BAIAP3O94812 1187 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 GPC3P51654 580 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 CRYBB1P53674 252 aaPredicted RBP17.25■□□□□ 0.35
TREX1-201ENST00000433541 CDC42EP1Q00587 391 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
TREX1-201ENST00000433541 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
TREX1-201ENST00000433541 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 PLEKHG4Q58EX7 1191 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
TREX1-201ENST00000433541 APBB2Q92870 758 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 CEP89Q96ST8 783 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 GCOM2Q9BZD3 368 aaPredicted RBP17.25■□□□□ 0.35
TREX1-201ENST00000433541 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
TREX1-201ENST00000433541 A0A087WZ62 844 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 IGKV6-21A0A0C4DH24 114 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 EFCAB14O75071 495 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 EYA4O95677 639 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 GRB10Q13322 594 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 TFDP1Q14186 410 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 GPNMBQ14956 572 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 HABP4Q5JVS0 413 aaKnown RBP17.24■□□□□ 0.35
TREX1-201ENST00000433541 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 LINC01465Q8N7H1 131 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 SYMPKQ92797 1274 aaKnown RBP17.24■□□□□ 0.35
TREX1-201ENST00000433541 EPSTI1Q96J88 318 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 FDXACB1Q9BRP7 624 aaPredicted RBP17.24■□□□□ 0.35
TREX1-201ENST00000433541 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
TREX1-201ENST00000433541 POLR3FQ9H1D9 316 aaPredicted RBP17.24■□□□□ 0.35
TREX1-201ENST00000433541 CXXC1Q9P0U4 656 aaPredicted RBP17.24■□□□□ 0.35
TREX1-201ENST00000433541 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 GPR182O15218 404 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 SLC26A4O43511 780 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 CUTAO60888 179 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 PPP6R2O75170 966 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 GPR32O75388 356 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 AMHP03971 560 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
TREX1-201ENST00000433541 PLCG1P19174 1290 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
TREX1-201ENST00000433541 MXD4Q14582 209 aaPredicted RBP17.23■□□□□ 0.35
TREX1-201ENST00000433541 ZNF410Q86VK4 478 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 MYOCDQ8IZQ8 938 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 ZBED2Q9BTP6 218 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 INO80BQ9C086 356 aaPredicted RBP17.23■□□□□ 0.35
TREX1-201ENST00000433541 XPNPEP1Q9NQW7 623 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 PADI3Q9ULW8 664 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 NOC2LQ9Y3T9 749 aaKnown RBP17.23■□□□□ 0.35
TREX1-201ENST00000433541 SQORQ9Y6N5 450 aa17.23■□□□□ 0.35
TREX1-201ENST00000433541 RANBP2P49792 3224 aaKnown RBP17.22■□□□□ 0.35
TREX1-201ENST00000433541 DENND3A2RUS2 1198 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 LRRIQ4A6NIV6 560 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 ASAP2O43150 1006 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
TREX1-201ENST00000433541 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.35
TREX1-201ENST00000433541 EIF4BP23588 611 aaKnown RBP17.22■□□□□ 0.35
TREX1-201ENST00000433541 PHKA2P46019 1235 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 WDR5P61964 334 aaKnown RBP17.22■□□□□ 0.35
TREX1-201ENST00000433541 HYIQ5T013 277 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 KCNK18Q7Z418 384 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
TREX1-201ENST00000433541 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
TREX1-201ENST00000433541 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.21■□□□□ 0.35
TREX1-201ENST00000433541 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.21■□□□□ 0.35
TREX1-201ENST00000433541 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
TREX1-201ENST00000433541 UPP2O95045 317 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 PLA2G4BP0C869 781 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 DARSP14868 501 aaKnown RBP17.21■□□□□ 0.35
TREX1-201ENST00000433541 CYP11B2P19099 503 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 FGFR4P22455 802 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 STAT6P42226 847 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 TCTN1Q2MV58 587 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 CATSPER4Q7RTX7 472 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 PDILTQ8N807 584 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 VWCEQ96DN2 955 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms